PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc01237.1.g00170.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 100aa MW: 11580.3 Da PI: 8.8164

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc01237.1.g00170.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	55.4	1.2e-17	25	65	9	49
RWP-RK 9 dlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 +++ F+l i+d A e g+c++ LKriCR++G++RWP Rk+ Zpz_sc01237.1.g00170.1.am.mk 25 EIRTRFHLRIEDTAAEPGICQSSLKRICRNHGVPRWPGRKV 65 7999************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.321	4	88	IPR003035	RWP-RK domain
Pfam	PF02042	2.7E-15	25	65	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 100 aa Download sequence Send to blast
MDLSSWSFLK LGTTQELEGL FMWPEIRTRF HLRIEDTAAE PGICQSSLKR ICRNHGVPRW 60 PGRKVWFRLE QLSKLAMEAM ARQGEAPGEE GGHRRQEMIA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc01237.1.g00170.1.am.mk

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP47125	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	3e-10	Nin-like family protein