PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01241.1.g00200.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 735aa    MW: 77762.8 Da    PI: 7.6601
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01241.1.g00200.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.61.9e-26495553259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +Dg++WrKYGqK+ kg+++pr+YY+Ct++ +Cpv+k+v+r+ ed +v+++tY++ H h+
  Zpz_sc01241.1.g00200.1.am.mk 495 SDGCQWRKYGQKMPKGNPCPRAYYQCTMSaDCPVRKQVQRCVEDRTVLITTYQNYHSHP 553
                                   7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-27489555IPR003657WRKY domain
PROSITE profilePS5081126.28489555IPR003657WRKY domain
SuperFamilySSF1182904.18E-24492555IPR003657WRKY domain
SMARTSM007746.4E-29494554IPR003657WRKY domain
PfamPF031064.1E-22496553IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    Send to blast
MSISMRLAFP APATAPASPP RLRVRAAGTG ASPHVSRVAA LRRETDALRG CASLPLKPMP  60
LGAGQPCRRR GDAAVCLSSP YMSAHTMQWI SAGATAGTQG GAILSLAIAG YLAFQHITRV  120
GEPRRLARSR LMDSLATGLE RSKNDGAAER ERSPLPAASP PVALGSDVGA GAGAGAEERR  180
EAPTSERREI DFFEREKKSA GIDHAPADAD AALDDLRIVK DDLTLNVGRK RKSASEKSSI  240
DDHDGDYHDN SNEGDGRKGN EVDDEVCRTA RTIHVQLELT KAELRCVKEE NERLRNLISH  300
ANAAYRSLQA HIVRMMEQQQ LNVDPEKKEQ DASLLSLGTA PDSGVDSAPS PGKNNLGLGW  360
IAPEMMPLPT FDHLRHHLRE VGSSTKEAPL PQHFPQGWLP SPDKVPEYLP AKAPEPVPAA  420
GPAGTMRKVD VHFTAAMSLD VDLEARLLLQ CPCSGHRSFP CARAAPLPSE LRLSRAAPLQ  480
HCLPGRRSSA SVKISDGCQW RKYGQKMPKG NPCPRAYYQC TMSADCPVRK QVQRCVEDRT  540
VLITTYQNYH SHPLPPAARA MASQTAEAAS MLLSGSMPTA DGSLMAGSNF LARCAMLPCS  600
SGVASISASE PFPSLTLDLT HTSTQPPRPV PDQLQAALAE AARPVQLPQP HDKLSAVLAA  660
AGVKATDGGV LADTFSAAAA IISDPNFTAA LADAIKSYIG SGSGSGGSSG TVQPLESGGD  720
DNSCSKEDKA GGNSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-174945571476WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01241.1.g00200.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025881266.11e-115probable WRKY transcription factor 31
TrEMBLA0A0E0L5U91e-121A0A0E0L5U9_ORYPU; Uncharacterized protein
STRINGOPUNC05G23690.11e-121(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP126952734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.14e-57WRKY family protein