PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01247.1.g00180.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 314aa    MW: 34469.1 Da    PI: 5.9839
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01247.1.g00180.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.64.7e-101091275
                           NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgk....rkn 75
                                   pG+rF+Pt  ++v +yL + ++g++++ + +  i+++ iy+ eP  L  k++    +++ +fF++  ++++++     r+ 
  Zpz_sc01247.1.g00180.1.am.mk 10 CPGIRFQPTPRDVVAYYLPRLIAGEQVHPAICplIHRTSIYTDEPGVLAGKFDPtpVKDDRFFFTTVVRQKPQNGrgwdRQD 91
                                  79************************55444335**************8544332234477999988887775442333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.11E-10789IPR003441NAC domain
PROSITE profilePS5100510.4869157IPR003441NAC domain
PfamPF023653.5E-51194IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MAKPIKSALC PGIRFQPTPR DVVAYYLPRL IAGEQVHPAI CPLIHRTSIY TDEPGVLAGK  60
FDPTPVKDDR FFFTTVVRQK PQNGRGWDRQ DRRAPAAKEY SCARSVKDAV VGDKECVFCR  120
VYVSPNAATN NKKKPPPLII DAATPPPQFL ASPSSKRIEA APESSIGSPS SPTSPRPCTP  180
RPPCSPAHGS PWSPSVFTYI TTTMHAKAAL LASARIALVA SPDGGFLFKR KMISMKLFDK  240
LHLLQTYEPA EEEETAMGPE NPAAAVDNDF DDLINNFKVS LPADAPDADE YDERFSCSFE  300
ELLNVDEEEQ GHQD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01247.1.g00180.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.12e-08NAC domain containing protein 52