PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01323.1.g00080.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 329aa    MW: 36408.1 Da    PI: 7.5377
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01323.1.g00080.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.23.5e-15421742128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleev.ikevd.iykvePwdLpkkvka..eekewyfFskrdkkya...tgk 72 
                                    +G+rF+Pt  e+v+++L + ++g+    +++ +  i++++ +y+ eP dL  +++    +++ +fF++  ++++   ++ 
  Zpz_sc01323.1.g00080.1.sm.mk  42 HQGYRFQPTPREVVSRHLPRLIAGELrlmHDAIRPyIHDTNvVYDREPDDLAGMFQPtpATDDRFFFTTVVRQKHrpgSSV 122
                                   68*********************99866533333459999637888*****853333225557899988776666233455 PP

                           NAM  73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   r  r++  g W  + +   + ++++ ++g  + L +     ++g  tdW+m+ey+ 
  Zpz_sc01323.1.g00080.1.sm.mk 123 RYVRVAGPGSWALQRSIDVLDEAGTVKIGELRRLRYK----KNGAYTDWLMKEYSC 174
                                   8888999****9888766555668899********97....78999********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.75E-1936196IPR003441NAC domain
PROSITE profilePS5100521.52341196IPR003441NAC domain
PfamPF023656.7E-1043173IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MRAREEDEAA ARGGRRGKRR LRLASLARIE TPPPIKEESA LHQGYRFQPT PREVVSRHLP  60
RLIAGELRLM HDAIRPYIHD TNVVYDREPD DLAGMFQPTP ATDDRFFFTT VVRQKHRPGS  120
SVRYVRVAGP GSWALQRSID VLDEAGTVKI GELRRLRYKK NGAYTDWLMK EYSCACSVKD  180
AVDGDNERVF CRIYVSPNAA NNNKKRPLPL SLKSPSPKRI QRAPVAPIGP IPPAGCTTKS  240
TLLSPHRPAA GPSAPTPPAD QAPHPDTPRP APVSRLPVPF VSPDPLQSTE DAVDDDFDEL  300
FDKLDTMLAC EPAGDEETTA DPDDSEGTL
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01323.1.g00080.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012703694.15e-47uncharacterized protein LOC101768364
TrEMBLA0A368S8U72e-45A0A368S8U7_SETIT; Uncharacterized protein
TrEMBLK3ZME82e-45K3ZME8_SETIT; Uncharacterized protein
STRINGSi011838m8e-46(Setaria italica)
STRINGSi027763m3e-46(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.26e-09NAC domain containing protein 50