PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01339.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 281aa    MW: 31341.7 Da    PI: 7.4591
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01339.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.21.1e-08175204130
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel 30 
                                   lppGfrFhP dee++++yL +k++gk+ e+
  Zpz_sc01339.1.g00020.1.am.mk 175 LPPGFRFHPYDEEIITFYLMPKATGKDKEI 204
                                   79**********************998665 PP
2NAM24.57.4e-0819623584120
                           NAM  84 katgkdkevlskkgel...vglkktLvfykgrapkgektd 120
                                   katgkdke+++++  l   vg+kktLvfy+grapkg + d
  Zpz_sc01339.1.g00020.1.am.mk 196 KATGKDKEIYQASAMLptiVGMKKTLVFYTGRAPKGPEDD 235
                                   89*********74433666****************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.14E-13173232IPR003441NAC domain
PfamPF023656.3E-6176224IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MCTARPRPSR TRSNPPTQGI TTRSLYIHLT TPTTAWTKPT PDQASLANQS NNSRTAETSP  60
TETRTEYWVD PRGHLSREIR GRPSEEEGGE IFVGVLRPSP PPPSRGSLNG RYERPAPTSC  120
LHESRRLLKR AVAIASLSSF LDILQIFERM DWRSMADHQE QEGVRGGVDD CCMNLPPGFR  180
FHPYDEEIIT FYLMPKATGK DKEIYQASAM LPTIVGMKKT LVFYTGRAPK GPEDDFLVEL  240
GVLCPNMDPT MPFYSTIDAS TSVAPMMPPM TSMGTMRIDG I
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01339.1.g00020.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04060.14e-11NAC domain containing protein 46