PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01354.1.g00180.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 97aa    MW: 10747 Da    PI: 4.4721
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01354.1.g00180.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.52.5e-141495280
                           NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratks 80
                                  ppG+ F+Ptdeel+ +yL ++  g++  +  v +++    +++Pw+L +   ++ ++    fF  rd++ ++ +r++r    
  Zpz_sc01354.1.g00180.1.am.mk 14 PPGLVFDPTDEELIGYYLLPRSLGEPEAFPGViVEDNTAANTQPWKLLRnhGLSDDDVPAAFFYVRDESRPNARRSRRCDGG 95
                                  8*************************888788355558999******74123333444568888889999999999997554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.18E-15996IPR003441NAC domain
PROSITE profilePS5100519.2361397IPR003441NAC domain
PfamPF023651.0E-71488IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MVMSPAKFLG DDHPPGLVFD PTDEELIGYY LLPRSLGEPE AFPGVIVEDN TAANTQPWKL  60
LRNHGLSDDD VPAAFFYVRD ESRPNARRSR RCDGGGT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01354.1.g00180.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004954806.12e-17NAC domain-containing protein 48
TrEMBLA0A1E5VKK17e-22A0A1E5VKK1_9POAL; Uncharacterized protein
STRINGPavir.Aa02111.1.p9e-21(Panicum virgatum)
STRINGSi019916m2e-20(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.13e-10NAC domain containing protein 45