PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01412.1.g00050.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 462aa    MW: 49726.9 Da    PI: 10.1375
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01412.1.g00050.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57394.61e-29183280297
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 
                                   +++rlws  De+v+L+Gl  ++ak+g+   +++di++++  + +++s+kv+++ql++K+rrLK+K+++  +++k+g++p+f
  Zpz_sc01412.1.g00050.1.sm.mk 183 RPSRLWSTGDELVILRGLAAYRAKHGVlpGSMHDISKLHGRIGNELSVKVTTTQLSDKVRRLKQKYHQLATRTKNGRDPDF 263
                                   679************************877888************************************************ PP

                        DUF573  81 skehdqkifelskkiWg 97 
                                    +++d++++el kk+Wg
  Zpz_sc01412.1.g00050.1.sm.mk 264 PTPQDHSVYELGKKVWG 280
                                   ****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.2E-27185280IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MAPKRPAAAA ASGSASEASD AEMDASRHPS SPSASKTPPS NPNPKPAPAA EDSAAAGSDS  60
GAAYDSDADH RPAPPKPAAS PSRRAARRSP KPRSRSPTPG ANSDSDGSAA PVASEADPAA  120
DSEDVNASPL PPPRSSRAEA VIVKPLISRP MDPPRRSVPS FSEPRPKRPR SAAVPAVMEQ  180
LKRPSRLWST GDELVILRGL AAYRAKHGVL PGSMHDISKL HGRIGNELSV KVTTTQLSDK  240
VRRLKQKYHQ LATRTKNGRD PDFPTPQDHS VYELGKKVWG AIAGAGGGVI AEYENAGAGY  300
SEEERQNVES DENMDSGRDD RERKNKRLKP IALANGYGTR FGATSASSRG KIEFEKGKDA  360
YPYLWETVED LSRQHPNGVA FKKAFEMIEG PKARVMEEKL RKFRVTEVRH QLRRMELMKE  420
TVQMVLDALE GDVGIICATP GTSPFPVASL FLPLNHRGIM AP
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01412.1.g00050.1.sm.mk
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956982.11e-166STOREKEEPER protein
TrEMBLA0A3L6TCP41e-180A0A3L6TCP4_PANMI; Uncharacterized protein
STRINGGRMZM2G134866_P021e-165(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.13e-11DNA-binding storekeeper protein-related transcriptional regulator