PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01488.1.g00190.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 217aa    MW: 24669.1 Da    PI: 9.8388
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01488.1.g00190.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.16.9e-1194135351
                             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                                      +GV++  k+ +W A I++      +k+++lg+ gt  eAa+++++a+ 
  Zpz_sc01488.1.g00190.1.am.mkhc  94 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQREAAQLYDRAAF 135
                                     79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.29E-793138IPR016177DNA-binding domain
PfamPF008472.3E-593136IPR001471AP2/ERF domain
SMARTSM003809.6E-493150IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-596139IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MVSLRRRRLL GLCSGKGSLP VDLPKPIENV EPVQSNVKPF SVHPLPFISS VLEDSPNGTD  60
SLKEERTQYY PGKEIKRRKR HKRKQYVDQE PCIMRGVYFK NMKWQAAIKV DKKQIHLGTV  120
GTQREAAQLY DRAAFMCGRE PNFELCEEEK QELKKYTWED FLAMTRNTIT SKKQRKVGLL  180
RRSKADLFTG QSDADPDMIS GGGSSNSDNG EAENSAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRKRHKRKQ
27784RKRHKRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01488.1.g00190.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001151501.11e-122uncharacterized protein LOC100285135
TrEMBLC0P9B01e-121C0P9B0_MAIZE; Ethylene-responsive transcription factor-like protein
STRINGSi018306m1e-119(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.29e-40ERF family protein