PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01533.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 249aa    MW: 27463.2 Da    PI: 8.0937
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01533.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.91.7e-1181137359
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                                   e +r rr+ +NRe+ArrsR RK+ ++ eL   v  L + N++L +el++    ++ +
  Zpz_sc01533.1.g00020.1.am.mk  81 EERRRRRMVSNRESARRSRMRKQRQLSELWAQVVYLRGANRRLLDELNRAIRDCSDV 137
                                   67899******************************************9987777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.8E-1074135No hitNo description
SMARTSM003382.4E-1279143IPR004827Basic-leucine zipper domain
PfamPF001703.8E-980137IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.47381144IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-1083132No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
CDDcd147029.44E-1688135No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MLHQHHYQGG LASLHCLPPP DPAFHAHYHS NMITMVPSSF NFSPAAHELI CEAPAVAGKS  60
SAGYGGVEDV YSSHSTVMAE EERRRRRMVS NRESARRSRM RKQRQLSELW AQVVYLRGAN  120
RRLLDELNRA IRDCSDVRCE NARLEKEKAE LKATTALLPS LFSTDDGCES MEAEVTAVLL  180
PSLFSIHDGC VRIHGGRGVS ALKKGDGNDE ASTNRKPTPI PPQLLEWPSP TRGATPLTTN  240
LLICGSVLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195102RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01533.1.g00020.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1083195e-66AK108319.1 Oryza sativa Japonica Group cDNA clone:002-141-G12, full insert sequence.
GenBankAP0061695e-66AP006169.3 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:OSJNBa0026C08.
GenBankAP0149655e-66AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence.
GenBankCP0126175e-66CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025799413.17e-65bZIP transcription factor 2-like
TrEMBLA0A2T7ETI36e-64A0A2T7ETI3_9POAL; Uncharacterized protein
STRINGSi031238m8e-64(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-12basic leucine-zipper 42