PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc01647.1.g00160.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 442aa MW: 48261.4 Da PI: 5.4367

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc01647.1.g00160.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37	7.7e-12	295	320	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+r+rWt++LHerFv+ v+qLGG+++ Zpz_sc01647.1.g00160.1.sm.mkhc 295 KTRIRWTQDLHERFVDSVNQLGGADR 320 68*********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-9	294	324	IPR009057	Homeodomain-like
Pfam	PF14379	7.8E-19	341	386	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence Send to blast
MISTGGTVDG SFDLDFSFLF LIKEIPKTQG VKYLIDICGY FDWLPEHKRF PIQFRDSVIT 60 AMNAKKIRFH DHHYGSQMCD PQLFQATTAA LSFHPGFVSS APQQDGGVGG WPPEEYSPTP 120 RSVLATQGGC VGSDTAAFFA AEDLLGMARF DCALPPVAAL KTAPFRRSQE ADQLYRSVDP 180 PLLRDDSVRT YYVPPQQREA AKAPPALKLP LQQHQQEQAQ GLFGNAFDAG LLLGGEPKNH 240 SFSPHVAAST LLPAIDAPSM QIPGENALSM SCTMGAPATH TSKVITLPGQ GAPSKTRIRW 300 TQDLHERFVD SVNQLGGADR KHEKRAAGND VLNLDPNTGE QITEALRVQL DVQRRLHEQL 360 AMQRNLQLKI EEQGKRLQKM FEEQLKASKS VLEPREQLQG AGAALDEVIG VGDEEDDACD 420 DVQLLSVASS GCNEAGFPSK IS

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence Send to blast

MISTGGTVDG SFDLDFSFLF LIKEIPKTQG VKYLIDICGY FDWLPEHKRF PIQFRDSVIT  60
AMNAKKIRFH DHHYGSQMCD PQLFQATTAA LSFHPGFVSS APQQDGGVGG WPPEEYSPTP  120
RSVLATQGGC VGSDTAAFFA AEDLLGMARF DCALPPVAAL KTAPFRRSQE ADQLYRSVDP  180
PLLRDDSVRT YYVPPQQREA AKAPPALKLP LQQHQQEQAQ GLFGNAFDAG LLLGGEPKNH  240
SFSPHVAAST LLPAIDAPSM QIPGENALSM SCTMGAPATH TSKVITLPGQ GAPSKTRIRW  300
TQDLHERFVD SVNQLGGADR KHEKRAAGND VLNLDPNTGE QITEALRVQL DVQRRLHEQL  360
AMQRNLQLKI EEQGKRLQKM FEEQLKASKS VLEPREQLQG AGAALDEVIG VGDEEDDACD  420
DVQLLSVASS GCNEAGFPSK IS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc01647.1.g00160.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025822779.1	1e-178	probable transcription factor KAN2
Refseq	XP_025822780.1	1e-178	probable transcription factor KAN2
TrEMBL	A0A2T7D1E3	1e-176	A0A2T7D1E3_9POAL; Uncharacterized protein
STRING	Si022099m	1e-176	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6933	37	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	4e-31	G2-like family protein