PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01670.1.g00090.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 491aa    MW: 51459.7 Da    PI: 7.8777
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01670.1.g00090.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.2e-11160188331
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkas 31 
                                   r+h+e+ErrRR+riN  +++Lr+llP+ +
  Zpz_sc01670.1.g00090.1.am.mk 160 RSHSEAERRRRQRINGHLARLRSLLPNTT 188
                                   78************************964 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.998157213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-11160186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-8160188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.87E-7160199No hitNo description
SuperFamilySSF474591.57E-10161185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-5163318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-11292322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-10292324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2602.1E-6368416No hitNo description
SuperFamilySSF550212.98E-5368418No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MSQAVLQSPA VSTTTRPAHR PAGGLHGSHE ALLLHAAGSD AGDVVHGQAS GLLPCTWLGP  60
ATAPSYPYMA PHAPPAPGHL FGVDDAAAGP FGFDIGGYGG GAGVGVGLFG LDPPSHQHHG  120
MVADAGSSRV VWGLLGTLQA ELGRMTAKEI LDAKALAASR SHSEAERRRR QRINGHLARL  180
RSLLPNTTKV IDALRHAREG LVGNRAPCGM RDRSSSPCKT RAHARVRAHH LSLTQGVATH  240
QKLSSGSSRP GRACKGCSHA RDFCKLFLHA RMPSSHQTRP LDRLLLSPTA TTTLVTDKAS  300
LLAEVIEHVK ELKRQTSAVL DAAERQEDQQ GDAPSATQQL LRLLPTEADE LTVDAAEDGD  360
GRLVVRASLC CEDRAGLIPD VARALAALRL RARRAEIATL GGRVRNVLLI TADDDEAEAD  420
GDDDVDGDGC EGAGAAQSHR RHELVAAVEE ALRGIMDRKA ASSGDASSSS AGSGSLKRQR  480
MSGGAYEQGS S
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01670.1.g00090.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020402268.13e-57transcription factor bHLH30
TrEMBLA0A1D6KP738e-56A0A1D6KP73_MAIZE; Transcription factor AIG1
TrEMBLA0A317Y7511e-56A0A317Y751_MAIZE; Transcription factor bHLH30
STRINGSb07g021170.14e-54(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3365434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.18e-28bHLH family protein