PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01820.1.g00070.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 339aa    MW: 38840.8 Da    PI: 4.2163
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01820.1.g00070.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573379.3e-12147234497
                        DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83 
                                   +++ws++D + +L  l d++ k+++ p + +++a+ +   k+  ++++ ++l  Ki++LK  +k++vkk         +++
  Zpz_sc01820.1.g00070.1.sm.mk 147 RKVWSNNDAVRILELLGDYRRKHDTLPENkHLEAVLRGQLKR--VQYTLKDLNAKIKSLKSLYKRNVKK-----ARLPTNA 220
                                   689*****************9999877664666666555444..5778899******************.....667799* PP

                        DUF573  84 hdqkifelskkiWg 97 
                                   hd+ +f lsk++Wg
  Zpz_sc01820.1.g00070.1.sm.mk 221 HDRRVFLLSKQVWG 234
                                   *************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.7E-14147234IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MAPKRRALPP PPSVVEPSVM TGTSSGSDEL EEVIAPSPRA RSPKKNKAAP PLQHPEASDK  60
EEEEEQQEET DGEEEDDGND EEADGEEKEE EAEADGEEEE EEEEEEEEEE EEEEEEEEEE  120
KEEEEAVGKE EDEEEEVRIV PAASFYRKVW SNNDAVRILE LLGDYRRKHD TLPENKHLEA  180
VLRGQLKRVQ YTLKDLNAKI KSLKSLYKRN VKKARLPTNA HDRRVFLLSK QVWGPVANPA  240
DATVPADFEE MCAMFPYLGD VLKELKTENP GVFNKEFSLI PKEKARALDK KFKEEVEEEI  300
KVQENAYKVK NKISAVSSFW TLSVPTFSNM IQPTERDRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01820.1.g00070.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3573234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.11e-06DNA-binding storekeeper protein-related transcriptional regulator