PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01825.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 153aa    MW: 17072.1 Da    PI: 7.6882
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01825.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.21.2e-152483463
                                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                                   +re+r+ +NRe+ArrsR+RK++ ++eL ++v+ L+aeN + + ++  ++++ +++++e+
  Zpz_sc01825.1.g00010.1.am.mk 24 HRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQAENARVAARAADITEQHQRVEQEN 83
                                  58****************************************************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-112080No hitNo description
SMARTSM003381.9E-172185IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.452386IPR004827Basic-leucine zipper domain
PfamPF001702.4E-122483IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-92579No hitNo description
CDDcd147022.49E-162677No hitNo description
PROSITE patternPS0003602843IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006971Biological Processhypotonic response
GO:0009267Biological Processcellular response to starvation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MSSSSLSPGG RLSRSDGDSA ADTHRREKRR LSNRESARRS RLRKQQHLDE LVQEVARLQA  60
ENARVAARAA DITEQHQRVE QENTVLRARA AELGDRLRSV NEVLRVVEEF SGVAMDIQDE  120
LPVDDPLLRP WQLPCPAAAM PIGGATAAHM LQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13743RRSRLRK
23744RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtMay contribute to developmentally specific patterns of gene expression. Binds specifically to ocs elements which are transcriptional enhancer found in the promoters of several plant genes. OCSBF-1 is able to bind to a site within each half of the ocs element as well as to animal AP-1 and CREB sites.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00419DAPTransfer from AT3G62420Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01825.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0556341e-144BT055634.2 Zea mays full-length cDNA clone ZM_BFc0087G10 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025808697.16e-92ocs element-binding factor 1
SwissprotP240682e-87OCS1_MAIZE; Ocs element-binding factor 1
TrEMBLA0A2T7EHZ02e-91A0A2T7EHZ0_9POAL; Uncharacterized protein
TrEMBLA0A3L6R9762e-91A0A3L6R976_PANMI; Ocs element-binding factor 1
STRINGPavir.Cb00560.1.p1e-92(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188635100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.14e-29basic region/leucine zipper motif 53
Publications ? help Back to Top
  1. Singh K, et al.
    OCSBF-1, a maize ocs enhancer binding factor: isolation and expression during development.
    Plant Cell, 1990. 2(9): p. 891-903
    [PMID:2152133]