PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01864.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 302aa    MW: 33375.4 Da    PI: 9.919
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01864.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.75.2e-1599150157
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeeke 57 
                                   lppGfrFhP+dee++++yL +kv +++++   +i e++i+++ePw+Lp+    ++ke
  Zpz_sc01864.1.g00020.1.am.mk  99 LPPGFRFHPHDEEIITFYLIPKVLNSNFTS-VAIGEANIINSEPWELPS----KDKE 150
                                   79*************************988.67**************93....2333 PP
2NAM44.84e-1414719188129
                           NAM  88 kdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrle 129
                                   kdke++++     + vg+kktLvfy+grapkgekt W+mheyrle
  Zpz_sc01864.1.g00020.1.am.mk 147 KDKEIYQAsvmFPTIVGMKKTLVFYTGRAPKGEKTGWIMHEYRLE 191
                                   677777743333345****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.83365213IPR003441NAC domain
SuperFamilySSF1019411.57E-3296211IPR003441NAC domain
PfamPF023657.2E-16100190IPR003441NAC domain
SuperFamilySSF482647.03E-10231302IPR001128Cytochrome P450
Gene3DG3DSA:1.10.630.104.6E-9232299IPR001128Cytochrome P450
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0005506Molecular Functioniron ion binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MIAKCHHTER AKDTHRDPLR VGGGCRLKRH RQWFNRVPTT WHGGQTETGR CGAAEVRRGG  60
GDRGVLVAEC VDGADWRSMT DHLEQEGIRG GVDDGCLNLP PGFRFHPHDE EIITFYLIPK  120
VLNSNFTSVA IGEANIINSE PWELPSKDKE IYQASVMFPT IVGMKKTLVF YTGRAPKGEK  180
TGWIMHEYRL EGSGKLYCPT SSSNSTISKL FLALVAIVLP VILHVVTRAK NPRPARLPPG  240
SLGLPVIGQS LGLLRAMRSN TAERWIKDRV DRYGPVSKLS LFGTPTVFVT GPAANKFVFC  300
SS
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01864.1.g00020.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0968532e-56FP096853.1 Phyllostachys edulis cDNA clone: bphyem207b18, full insert sequence.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.21e-35Arabidopsis NAC domain containing protein 87