PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01963.1.g00080.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 195aa    MW: 21568.4 Da    PI: 9.5419
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01963.1.g00080.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY44.23.9e-14140167229
                                   --SS-EEEEEEE--TT-SS-EEEEEE-S CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCts 29 
                                   +Dgy+WrKYG K+++g++f+rsY+rC  
  Zpz_sc01963.1.g00080.1.sm.mk 140 EDGYEWRKYGEKSINGAQFTRSYFRCNE 167
                                   7*************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-12130167IPR003657WRKY domain
SuperFamilySSF1182903.66E-12133169IPR003657WRKY domain
SMARTSM007747.5E-7139191IPR003657WRKY domain
PfamPF031063.9E-11140167IPR003657WRKY domain
PROSITE profilePS5081111.554140165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MPDDCEGAVR EVAQVYELIK TKLPLFLLHH HGQQEPPLAR SLLSEALRAL NIALSAMTMM  60
QKRQQQREIS SSTTASPPLA VLKAKPQMSS PSAAPAAAGS GNGATTRTSA RSGKRRRSSV  120
TEGGKNSSSS WVNVTTVPYE DGYEWRKYGE KSINGAQFTR SYFRCNELDM ARIMAESLMG  180
DDPELQLLYN TFKYY
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01963.1.g00080.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978333.13e-48probable WRKY transcription factor 54
RefseqXP_004978526.14e-48probable WRKY transcription factor 54
TrEMBLK3Y9148e-47K3Y914_SETIT; Uncharacterized protein
TrEMBLK3ZJB71e-46K3ZJB7_SETIT; Uncharacterized protein
STRINGSi010706m1e-47(Setaria italica)
STRINGSi026670m2e-47(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-08WRKY DNA-binding protein 4