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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zpz_sc02084.1.g00140.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
BBR-BPC |
| Protein Properties |
Length: 394aa MW: 43427.2 Da PI: 10.3989 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc02084.1.g00140.1.sm.mk | genome | ZGD | View Nucleic Acid |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 340.9 | 3.1e-104 | 1 | 347 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssia.erdaki..............rernlalsekkaavaerd........ 57
mdddgs rn+g+ye k nlglqlms +a +rd+k + + +++++++++rd
Zpz_sc02084.1.g00140.1.sm.mk 1 MDDDGSLGiRNWGFYETV---KGNLGLQLMSPVApDRDTKSllpnstflhhhghqNAPGQQHHQQQHSHQPRDfgagggas 78
9*****999******988...**********9999******99999999987632111222344555566777******** PP
GAGA_bind 58 ...........maflqrdkalaernkalverdnkllalllvensla...........salpvgvqvlsgtksidslqq..l 114
m+f++++++l+ ++ +++k+l+ ++ + ++p+++q++++++++ ++ q
Zpz_sc02084.1.g00140.1.sm.mk 79 aampteprpvhMDFTRNEAWLHP-SQHQRAHEQKVLHFGPAGHVGHpghavhpghvvRHHPASYQMMPDARHALQMMQppE 158
***********************.8888889999999999988777888999**999999*******99988655544232 PP
GAGA_bind 115 se.....pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskae 190
pql+++ + +ee + +e ++ +++++ +kkrq ++pk++k kk+kk +++++ ++++ +r++ +
Zpz_sc02084.1.g00140.1.sm.mk 159 -AqsqpqPQLQPQEHPPCKEEGASPAL-VEDHSMVRNEQPVKKRQLRRQPKSPKPKKPKK-AVAPREDGAPNRPAPRARGP 236
.13567788888888866666555555.5556667777777889****************.66888888888877****** PP
GAGA_bind 191 kksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLek 271
kk +++v+ng+++D s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt+iS+yPLP+stkrrgaRiagrKmSqgafkk+Lek
Zpz_sc02084.1.g00140.1.sm.mk 237 KKAVGMVINGIDVDLSRIPTPVCSCTGSPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEK 317
********************************************************************************* PP
GAGA_bind 272 LaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
L++eGy+l+np+DLk++WAkHGtnkfvtir
Zpz_sc02084.1.g00140.1.sm.mk 318 LSGEGYNLNNPIDLKTFWAKHGTNKFVTIR 347
*****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MDDDGSLGIR NWGFYETVKG NLGLQLMSPV APDRDTKSLL PNSTFLHHHG HQNAPGQQHH 60
QQQHSHQPRD FGAGGGASAA MPTEPRPVHM DFTRNEAWLH PSQHQRAHEQ KVLHFGPAGH 120
VGHPGHAVHP GHVVRHHPAS YQMMPDARHA LQMMQPPEAQ SQPQPQLQPQ EHPPCKEEGA 180
SPALVEDHSM VRNEQPVKKR QLRRQPKSPK PKKPKKAVAP REDGAPNRPA PRARGPKKAV 240
GMVINGIDVD LSRIPTPVCS CTGSPQQCYR WGAGGWQSAC CTTSISTYPL PMSTKRRGAR 300
IAGRKMSQGA FKKVLEKLSG EGYNLNNPID LKTFWAKHGT NKFVTIRALG IGLTNAAGLL 360
ARDTLGERAG LLTMLDFDEE RKRGQEGEVG RRLE
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Positively regulates the homeotic gene BKN3. {ECO:0000269|PubMed:12795701}. |
