PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc02131.1.g00040.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 1127aa MW: 123691 Da PI: 7.8149

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc02131.1.g00040.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.9	2.3e-50	628	756	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknrat 78 +ppGfrFhPt+eel+++yLkkkv++++++l +vi++vd++k+ePwd+++ + + +++wy Fs++dkky+tg+r+nrat Zpz_sc02131.1.g00040.1.am.mk 628 VPPGFRFHPTEEELLTYYLKKKVASERMDL-DVIRDVDLNKLEPWDIQEkcGIGSgPQNDWYLFSHKDKKYPTGTRTNRAT 707 69**************************.9***********952433332556****************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+Wkatg+dk+++s ++ +g++ktLvfykgrap+g+k+dW+mheyrl Zpz_sc02131.1.g00040.1.am.mk 708 AAGFWKATGRDKAIYS-CTRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 756 ************.9999*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06814	3.7E-9	172	246	IPR009637	Lung seven transmembrane receptor-like
SuperFamily	SSF101941	1.57E-52	626	761	IPR003441	NAC domain
PROSITE profile	PS51005	50.024	628	796	IPR003441	NAC domain
Pfam	PF02365	4.8E-26	629	756	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0016021	Cellular Component	integral component of membrane
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1127 aa Download sequence Send to blast
MAVSPSSTAA AAALGVLALL LAAAAVPPAA AEIRETHHPA DEFGFTHSGV LELNVSDISF 60 DPQASAELDL SQLGFFLSTL DAWVHVLRQL QDLDVTCALQ SDLVKVAFSF DRLRPPTNPA 120 GVQVARSSSF SAAFRVSDPG QYTLIFANCL GGGLKVSMDV RSAMYNNLRE AARSDGKAAV 180 NLMKLTLFRQ YYVVVICYIY FTRVIVYALQ TITSYRYLWT SVMAGELATL AFYVFTGCRF 240 RPKVHNPYFV INDEEEEAAA EALNNGDVDE TTQRSAECWT PHWIDRLLFL QTPLRDGWIT 300 KPSQGHRRTT SGPTRPPHVA AHLGLASLSV FFCSVTTYPL MEITAPRWRG VSWNNGVRVR 360 CCRRKAGLDA ETPLRMRRRR RCYVELDAIS HSPMACSRDH AEGELNLDGD KAHVRSPSSS 420 LLLHALLSES TIQHEGTPID PEEVPDLVST CQPGARASWL QRATTKTCES ENYRIGRDLC 480 RQQRPRILAY GILERARRER KNQLEKNTSI SLSVAVADAV TVVAVVAGRG GYAGHPRHHD 540 MPPQHHSTDD FSPRPGVAPM RFRLAVLFPE IFKFVCHGSG CYMALFCVPR LLPLVVNLPL 600 PPSLSSSHFF LPGLARLAGT NPRLKSVVPP GFRFHPTEEE LLTYYLKKKV ASERMDLDVI 660 RDVDLNKLEP WDIQEKCGIG SGPQNDWYLF SHKDKKYPTG TRTNRATAAG FWKATGRDKA 720 IYSCTRRIGM RKTLVFYKGR APHGQKSDWI MHEYRLDDAD HPTAAAAGDP HYPSPPLASS 780 RTPPSQQHAT VHVMVDDDEV EISLSWVWGL SASSITRSAD ERRRGGWVGV NRATESAHPQ 840 DHQTCVPQAA DEPTKHRPAP AAGSHSAHRQ ALVVDFCERR RLHQQRDKNG TPPIRGGAAA 900 GEQEAQEEGW AICRMFKKKN LVLHHGQSNG SGATVAATVV SKMASVPSAM ESSPTSNGSS 960 SVTVRDHVKA AQMLHSGSNV DALDHILQYM GRSFGDDNNQ DTKPPAALQM DHHHLAAACP 1020 SSSFYGKFMK LPPLEHDGSV LLPNPAATDA SGIADWDSLD RLAAYELNGI SDASKNMVSF 1080 FDEPSAAATT GAFTSAYTSA GAGDGDLWSL ARSSVSSLHA DLTMNNV

Sequence ? help Back to Top

Protein Sequence Length: 1127 aa Download sequence Send to blast

MAVSPSSTAA AAALGVLALL LAAAAVPPAA AEIRETHHPA DEFGFTHSGV LELNVSDISF  60
DPQASAELDL SQLGFFLSTL DAWVHVLRQL QDLDVTCALQ SDLVKVAFSF DRLRPPTNPA  120
GVQVARSSSF SAAFRVSDPG QYTLIFANCL GGGLKVSMDV RSAMYNNLRE AARSDGKAAV  180
NLMKLTLFRQ YYVVVICYIY FTRVIVYALQ TITSYRYLWT SVMAGELATL AFYVFTGCRF  240
RPKVHNPYFV INDEEEEAAA EALNNGDVDE TTQRSAECWT PHWIDRLLFL QTPLRDGWIT  300
KPSQGHRRTT SGPTRPPHVA AHLGLASLSV FFCSVTTYPL MEITAPRWRG VSWNNGVRVR  360
CCRRKAGLDA ETPLRMRRRR RCYVELDAIS HSPMACSRDH AEGELNLDGD KAHVRSPSSS  420
LLLHALLSES TIQHEGTPID PEEVPDLVST CQPGARASWL QRATTKTCES ENYRIGRDLC  480
RQQRPRILAY GILERARRER KNQLEKNTSI SLSVAVADAV TVVAVVAGRG GYAGHPRHHD  540
MPPQHHSTDD FSPRPGVAPM RFRLAVLFPE IFKFVCHGSG CYMALFCVPR LLPLVVNLPL  600
PPSLSSSHFF LPGLARLAGT NPRLKSVVPP GFRFHPTEEE LLTYYLKKKV ASERMDLDVI  660
RDVDLNKLEP WDIQEKCGIG SGPQNDWYLF SHKDKKYPTG TRTNRATAAG FWKATGRDKA  720
IYSCTRRIGM RKTLVFYKGR APHGQKSDWI MHEYRLDDAD HPTAAAAGDP HYPSPPLASS  780
RTPPSQQHAT VHVMVDDDEV EISLSWVWGL SASSITRSAD ERRRGGWVGV NRATESAHPQ  840
DHQTCVPQAA DEPTKHRPAP AAGSHSAHRQ ALVVDFCERR RLHQQRDKNG TPPIRGGAAA  900
GEQEAQEEGW AICRMFKKKN LVLHHGQSNG SGATVAATVV SKMASVPSAM ESSPTSNGSS  960
SVTVRDHVKA AQMLHSGSNV DALDHILQYM GRSFGDDNNQ DTKPPAALQM DHHHLAAACP  1020
SSSFYGKFMK LPPLEHDGSV LLPNPAATDA SGIADWDSLD RLAAYELNGI SDASKNMVSF  1080
FDEPSAAATT GAFTSAYTSA GAGDGDLWSL ARSSVSSLHA DLTMNNV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-42	628	756	15	140	Stress-induced transcription factor NAC1

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	362	380	RRKAGLDAETPLRMRRRRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc02131.1.g00040.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT075080	1e-169	KT075080.1 Panicum virgatum secondary wall NAC master switch (SWN1) mRNA, complete cds.

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP36242	3	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	2e-68	NAC family protein