PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02354.1.g00080.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 1461aa    MW: 159091 Da    PI: 7.1588
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02354.1.g00080.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.2e-16482526250
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                                   +y+GVr+++ +gr++AeIrdp    k++ ++lg+f++ae Aa+a++aa+
  Zpz_sc02354.1.g00080.1.am.mk 482 KYRGVRRRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEAAARAYDAAA 526
                                   8********.7*********83...36********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.238.102.4E-1950140IPR011992EF-hand domain pair
SMARTSM000271.9E-952151IPR000261EH domain
SuperFamilySSF474731.01E-1655135IPR011992EF-hand domain pair
PROSITE profilePS5003113.23559156IPR000261EH domain
CDDcd000522.39E-2063133No hitNo description
PfamPF127634.6E-678128IPR000261EH domain
PROSITE profilePS502229.07496131IPR002048EF-hand domain
PROSITE profilePS5103218.36482526IPR001471AP2/ERF domain
CDDcd000183.44E-13482514No hitNo description
PfamPF008471.5E-9482526IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-21482528IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-15482527IPR016177DNA-binding domain
SMARTSM003801.6E-19482534IPR001471AP2/ERF domain
PRINTSPR003672.7E-6483494IPR001471AP2/ERF domain
PRINTSPR003672.7E-6505521IPR001471AP2/ERF domain
Gene3DG3DSA:3.80.10.105.5E-34787896IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520586.29E-327871036IPR032675Leucine-rich repeat domain, L domain-like
PfamPF082632.7E-9791828IPR013210Leucine-rich repeat-containing N-terminal, plant-type
SMARTSM0036974854878IPR003591Leucine-rich repeat, typical subtype
Gene3DG3DSA:3.80.10.105.5E-349431014IPR032675Leucine-rich repeat domain, L domain-like
SMARTSM00369230948971IPR003591Leucine-rich repeat, typical subtype
PfamPF138551.5E-79501009IPR001611Leucine-rich repeat
SMARTSM003695.8972995IPR003591Leucine-rich repeat, typical subtype
PRINTSPR000192.5E-5975988No hitNo description
SuperFamilySSF520585.35E-2212321378IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.0E-2412321378IPR032675Leucine-rich repeat domain, L domain-like
PfamPF082638.9E-812351273IPR013210Leucine-rich repeat-containing N-terminal, plant-type
SMARTSM003692412991323IPR003591Leucine-rich repeat, typical subtype
PRINTSPR000192.5E-512991312No hitNo description
PfamPF005600.3413011320IPR001611Leucine-rich repeat
SMARTSM0036912013571381IPR003591Leucine-rich repeat, typical subtype
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005509Molecular Functioncalcium ion binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1461 aa     Download sequence    Send to blast
MRESSADEWE RETQNEAAAR TVHSALSTVL RLLIARRRRE GTEMEVARSA AGVACSKEHQ  60
RIYAQWFALA DPGFVADGDG RVTGADATSF FAMSGLSRAH LKQVWAIADS KRQGYLGFPE  120
FVIAMQLVSL AQAGNEITQD SPKSEDLSTM DPPAMEGVDQ LVALMRVYGA LMWSLGKVLN  180
TPEVVRVYIG SFNDKPVNDS AVGPIGKDLF EKEQDDLLCD LKDIPKKACD RRVNEFVKRA  240
RAAKIHAYII GHLKKEMPAM MGKAKAQQRL IDNLEDEFAK VQREYHLPAG DFPDVEHFKE  300
VLGGYSIDKF EKLKPKMVQT VDDMLAYDIP ELLKNFRNPC TEAGNPVGGR EIPFLNSFVR  360
GEATAMYRDA DISSHVMLLV LQACTTEHGT MRRAPPPLLC AESLILSTDE VTQRTAQAHE  420
YAVTSSRPGD VDVVTRSGAN QQTDAAPGSW QDPREVDKAR AAEGRMRRAR PPPVPAPGVE  480
VKYRGVRRRP SGRYAAEIRD PAKKTPIWLG TFDSAEAAAR AYDAAASHSS TVESWSGGAP  540
GATIAGGVRA APAAEEDCRS YCGSSPSVLC EDDASAAGDE VAAPPPRCSP LPFDLNVPDP  600
SAADDMDWHC DTLLHLTRVQ LLLFRGWDVG IRGAASEHQT APPRHISVQA QLVGSGPAAK  660
LDFRRCSPAV ASCDGFQWPG WRVAAAPLSL EYFEVNNAYL RPRPPSRLSR ATVSARLAAW  720
KRGKTVSGVR TGQAVLEEWK PRVGCVDMGL KLGLTRETSS PRSSPRGQDQ EAALKQLVDV  780
CLSPSSSCKQ EEKISLLKFL AGLSRRSGLT NSWQNETNCC TWEGITCNTD GLVTDISLAS  840
MGLEGSISPS LGNLTGLLSL NLSSNSLSGE LPVELLLHRS IVVFDVSFNS LNGDLHKLPS  900
VSTGRATQVL KNSGNLTTLL LGTNFRGEAM PENETIDGGF QNLQIGHLKA LTALNLSFNN  960
LFGEVPQSIG NLTNLMVLDL SNNHLTGAIP TALENLNFLS EFNISNNDLE GPVPTGGQFS  1020
TYPDSSFIGN PKLCGPMLIR QHCNSVEAGP APTVPMEATV VSNTPAIISI RYRPAYAGAR  1080
PLWCQNFIAL RLGEEERGDE LGFRIELGRK ISSSLAGIVC TTTARDDRTH RKKLQSSGGW  1140
KGRRFSRCAR IARALDRVHG QSGAARGYGG GGRTCTGTPL AGLPFPSHLF STPKTKKLLR  1200
VWCFPASTCA IGVFSKPCPH IDGDADASPT SSCTEQEKNS LLQFLNELSH DAGLAMSWQE  1260
VRDCCKWEGI TCNQNETVIK VSLPSKGLQG HISESLENLT SLQYLNLSYN SLSGGLPREL  1320
MSSRSIIVLD VSFNQLSGDL HEMSYSTPGQ PIQIVKLSNL LILDLGENKF SGKIPDSIVL  1380
SSSKELVPWV LEMRSQGKQI EALDPILRST GHEEQMLQIL EVACNEERAG HKHRYSRSTV  1440
YMLSLRLLGI ETSRRSRSPV R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5mtv_A2e-48164361214414EH domain-containing protein 4
5mvf_A2e-48164361214414EH domain-containing protein 4
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02354.1.g00080.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0731241e-172AK073124.1 Oryza sativa Japonica Group cDNA clone:J033008E09, full insert sequence.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.18e-13ethylene response factor 8