PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02365.1.g00030.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 136aa    MW: 15561.6 Da    PI: 4.8678
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02365.1.g00030.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.19.1e-16121362125
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratks 80 
                                   ppG+ F+Ptd+el+++yL ++  gk  +l ++ +++ ++ +++Pw+L +++  +++  ++f+++ ++  a   r+     +
  Zpz_sc02365.1.g00030.1.sm.mk  12 PPGLIFDPTDKELIWHYLLPQSLGKLETLLSFvVEDNKVANTQPWKLFQNHGLSDNlPTFFYVCDERPDA--CRNCLCDGD 90 
                                   8********************9999977767648888**********75555555547799999888654..58888889* PP

                           NAM  81 gyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmhe 125
                                   g Wk +      d +vl   ++++ ++++ L f      +  + +Wvmhe
  Zpz_sc02365.1.g00030.1.sm.mk  91 GLWKIQKCeskdDPPVLIVgGTNVRWTRNNLNFNLD---S-GSFSWVMHE 136
                                   ****55431122455665557777999******832...3.3679****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-207136IPR003441NAC domain
PROSITE profilePS5100518.94811136IPR003441NAC domain
PfamPF023659.8E-1212136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MSAAKFFSDN HPPGLIFDPT DKELIWHYLL PQSLGKLETL LSFVVEDNKV ANTQPWKLFQ  60
NHGLSDNLPT FFYVCDERPD ACRNCLCDGD GLWKIQKCES KDDPPVLIVG GTNVRWTRNN  120
LNFNLDSGSF SWVMHE
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02365.1.g00030.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G29035.13e-08NAC domain containing protein 3