PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02404.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 279aa    MW: 31136 Da    PI: 6.1071
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02404.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.36.5e-1571474128
                           NAM   4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 
                                    f F P++  l+++yL+k ++g +    l  +  +++ d++++ P+ L +          + +++ ++ yfF+k++   ++
  Zpz_sc02404.1.g00050.1.am.mk   7 SFSFCPSNALLINHYLRKMIDGAEvfsnLANAAYFHDEDVCSAWPEVLVRahtmparvpsREAGDGQQFYFFTKARFIGNK 87 
                                   589*********************88653333459*************744677776654323355577888887755544 PP

                           NAM  71 ...gkrknratk.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                       +r+ + t  + +W+a g+ k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zpz_sc02404.1.g00050.1.am.mk  88 lnmRSRTIKNTGdKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 147
                                   1013344443334778*********965...67899999****66555515799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.7394163IPR003441NAC domain
SuperFamilySSF1019411.7E-217163IPR003441NAC domain
PfamPF023654.2E-118146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAAMDDSFSF CPSNALLINH YLRKMIDGAE VFSNLANAAY FHDEDVCSAW PEVLVRAHTM  60
PARVPSREAG DGQQFYFFTK ARFIGNKLNM RSRTIKNTGD KETWHAEGSA KPVDGTADGY  120
MTKLSYHVKT GPKTVEKPGW IMTEYSFKDT KEGDLVLCKI YKSPRSPGRS KAPSLPAMSD  180
RKRKVADDLE EATPSTRPRQ LDENHQHAAV PEFGAERSQT QAMPASLDSN SALEDIDWSW  240
FMPESEAERS QPHLAKPASL GSNVTLEDIE LYAKLLLAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02404.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.12e-08NTM1-like 8