PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc02440.1.g00130.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 644aa MW: 69155.1 Da PI: 8.6125

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc02440.1.g00130.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.9	1e-13	119	180	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e e kr r+ +NRe+A sRqRKk+++eeLe kv +++a +L +++ + e a+lk + Zpz_sc02440.1.g00130.1.sm.mkhc 119 EDEAKRRARLVRNRESAHLSRQRKKQYVEELEGKVNAMQATIADLSARISCVTAENAALKEQ 180 5789*****************************************************99987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00170	3.4E-12	119	180	IPR004827	Basic-leucine zipper domain
SMART	SM00338	5.8E-14	119	183	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.105	121	181	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.9E-16	123	181	No hit	No description
SuperFamily	SSF57959	6.88E-13	123	181	No hit	No description
CDD	cd14704	1.01E-19	124	175	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence Send to blast
MSEPSLLAPV AQDPFADLSF PELQVPPVDD TFAFEDFNLD DLDLDVDFDL DLFAADGQLS 60 QPPPLATSSS SAPSPERGSS SSSAGGDGGL RNEDSSESSS RSATGKDSCG KGKGDGAEED 120 EAKRRARLVR NRESAHLSRQ RKKQYVEELE GKVNAMQATI ADLSARISCV TAENAALKEQ 180 LGGATGGAPP PLPMYPAVYP LLMPLVHPAY AMRGSQVPLV PIPRLKFQQP TPASEPPAKK 240 PRKTKKVASV SLLGLLCLVM VCRCLIPAVN RMYGTTDTGE GFAFGPSHHH GRVLAVEGPS 300 NSVLEGTDPK PPKNASETLP ALLYLPRNGK HVKINGNLVI KSIVASEEAS RMSRYDEKSH 360 RSQRKEETSL AIPGNMAPLE AGEAVEPTAE VKNKLMALAP GDANMYREDD GLIPQWFSEA 420 MSGPMLSPGM CTEVFQFDVS SSSTHANGIV PVYSNSMANS SQNFTGNLPS GQPQKVKNRR 480 ILYSGAIPLK GSTSNVTEHL KAHPKNETYA RSKPVSSMVV SILADPREAG DRSSDGRISS 540 KSLSRKGSKL SYWPIGLVGI KADSQTRHEA HLLAHCLGGY RSPLTDQAHQ HWMRKGQTTT 600 SPNPWVPPNI NLRLRMSASS AFRFSSPATR PTGLAPQGRY HIGA

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence Send to blast

MSEPSLLAPV AQDPFADLSF PELQVPPVDD TFAFEDFNLD DLDLDVDFDL DLFAADGQLS  60
QPPPLATSSS SAPSPERGSS SSSAGGDGGL RNEDSSESSS RSATGKDSCG KGKGDGAEED  120
EAKRRARLVR NRESAHLSRQ RKKQYVEELE GKVNAMQATI ADLSARISCV TAENAALKEQ  180
LGGATGGAPP PLPMYPAVYP LLMPLVHPAY AMRGSQVPLV PIPRLKFQQP TPASEPPAKK  240
PRKTKKVASV SLLGLLCLVM VCRCLIPAVN RMYGTTDTGE GFAFGPSHHH GRVLAVEGPS  300
NSVLEGTDPK PPKNASETLP ALLYLPRNGK HVKINGNLVI KSIVASEEAS RMSRYDEKSH  360
RSQRKEETSL AIPGNMAPLE AGEAVEPTAE VKNKLMALAP GDANMYREDD GLIPQWFSEA  420
MSGPMLSPGM CTEVFQFDVS SSSTHANGIV PVYSNSMANS SQNFTGNLPS GQPQKVKNRR  480
ILYSGAIPLK GSTSNVTEHL KAHPKNETYA RSKPVSSMVV SILADPREAG DRSSDGRISS  540
KSLSRKGSKL SYWPIGLVGI KADSQTRHEA HLLAHCLGGY RSPLTDQAHQ HWMRKGQTTT  600
SPNPWVPPNI NLRLRMSASS AFRFSSPATR PTGLAPQGRY HIGA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269\|PubMed:22050533}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc02440.1.g00130.1.sm.mkhc

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305\|PubMed:22050533}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025800125.1	0.0	bZIP transcription factor 60-like
Swissprot	Q8LIB3	0.0	BZP60_ORYSJ; bZIP transcription factor 60
TrEMBL	A0A0K0K9Y4	0.0	A0A0K0K9Y4_ELECO; BZIP transcription factor b
STRING	Sb02g041070.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11179	30	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	4e-63	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Oono Y, et al. Analysis of ER stress in developing rice endosperm accumulating beta-amyloid peptide. Plant Biotechnol. J., 2010. 8(6): p. 691-718 [PMID:20331531] Hu J, et al. The Bphi008a gene interacts with the ethylene pathway and transcriptionally regulates MAPK genes in the response of rice to brown planthopper feeding. Plant Physiol., 2011. 156(2): p. 856-72 [PMID:21487048] Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant Cell Physiol., 2012. 53(1): p. 144-53 [PMID:22084314] Ohta M, et al. Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants. J. Exp. Bot., 2013. 64(18): p. 5429-41 [PMID:24153418] Cheng Q, et al. An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice. Plant Biol (Stuttg), 2015. 17(2): p. 419-29 [PMID:25255693]