PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02549.1.g00060.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 776aa    MW: 82449.8 Da    PI: 9.9769
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02549.1.g00060.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.91.7e-27602660259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+kk++r+a+d +v++ tY g Hnh+
  Zpz_sc02549.1.g00060.1.am.mk 602 NDGCQWRKYGQKVAKGNPCPRAYYRCTGApDCPVRKKLQRCAQDASVLVSTYDGVHNHP 660
                                   8**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF078472.6E-53122297IPR012864Cysteine oxygenase/2-aminoethanethiol dioxygenase
SuperFamilySSF511821.14E-26139277IPR011051RmlC-like cupin domain
Gene3DG3DSA:2.60.120.101.1E-11149276IPR014710RmlC-like jelly roll fold
Gene3DG3DSA:2.20.25.801.3E-27589660IPR003657WRKY domain
SuperFamilySSF1182905.75E-24594661IPR003657WRKY domain
PROSITE profilePS5081125.373596662IPR003657WRKY domain
SMARTSM007745.0E-32601661IPR003657WRKY domain
PfamPF031063.8E-23602660IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 776 aa     Download sequence    Send to blast
MRYMALEPSD EVLYERTVVS ATAMPIGGRK MAATPASAVS SPKQSHRRRR TGAVQTIYDV  60
SRDVFAAAAT PGFQPLPNDV ARLSAFLSTA CCMQASVALA CFFVNGLKDG DVVSFGAFFR  120
LHGLTLQDIG LDASIPYLRA APDGGRPRVT YLHFADTPTF SFGVFCLPQS AVIPLHDHPG  180
MTVFSKILLG SMHIQSYDWV TTPTPAGVPR ATRTSAGARL AKLHTDAAFD ASSETVVLYP  240
ETGGNLHRFT ATAPCVVLDV MGPPYCQAEG RDCAYYGAKA TRGAGEDNGQ YAWLKPVRRT  300
FELDSFHLRP TIRKPRAGGR SKRADGRPAK AAPAGNPSSD PAGDQSGHVS MFTCPININP  360
SPAGYLNCRV PVPLLIKPMF FNQVFGDRGS SRVRGRRQAA RRLRVQKGEE KWVVSLMEMK  420
TRVLEVMRDA EKGSDRHLQV PRIDASEERF RRVRNEAERR HRIGFPQLGD GPASTLPCRD  480
GTGDERPPGS FLALSLGATT NDPLRASLPA KRGEEASSAV ISLGLGLGLR SSSDGGGDET  540
VIGAKRQRTS DSGNGAGDVP SAVAAGPGRY REVGRGKNAS LPPPTRPGRV SFRTRCSAPT  600
INDGCQWRKY GQKVAKGNPC PRAYYRCTGA PDCPVRKKLQ RCAQDASVLV STYDGVHNHP  660
LTPYAAAMAS AMAAAADSSS SAPLVLPSSS SSFSSAPLRA VPVAMLPPQS YYAAATGSGV  720
TVPGAATSSR NPMAGIVEKA VADPKFRAAV MAAVASYVGE QCGGKISELL TLAPPC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-19589663275WRKY transcription factor 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02549.1.g00060.1.am.mk
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143192226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.18e-37WRKY DNA-binding protein 61