PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02571.1.g00020.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 140aa    MW: 15115.9 Da    PI: 9.2828
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02571.1.g00020.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.24.1e-13949146
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaa 46
                                  ++ykGVr+++ +g+Wv+eIr+p +   r r +lg++  +e Aa a+
  Zpz_sc02571.1.g00020.1.sm.mk  9 CRYKGVRRRR-WGKWVSEIRVPGT---RERLWLGSYAAPEAAA-AR 49
                                  78*****777.**********943...5**********55555.44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.20E-12940No hitNo description
PfamPF008471.7E-6948IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.1E-161048IPR001471AP2/ERF domain
SMARTSM003802.2E-71060IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-111048IPR016177DNA-binding domain
PROSITE profilePS5103215.1851047IPR001471AP2/ERF domain
PRINTSPR003677.1E-71122IPR001471AP2/ERF domain
PRINTSPR003677.1E-73349IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MSGGADRRCR YKGVRRRRWG KWVSEIRVPG TRERLWLGSY AAPEAAAARE RASPVSPARP  60
LVDRVGIGIA RCGGHDEREH WPYAATAGSD SAGIASATAT SWGTAPRSDG SRSSSADAAC  120
ELERRLVYGD ISVDDIDILM
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02571.1.g00020.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9545301e-37EU954530.1 Zea mays clone 1469452 transcriptional factor TINY mRNA, complete cds.
GenBankKJ7276761e-37KJ727676.1 Zea mays clone pUT5603 AP2-EREBP transcription factor (EREB63) gene, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2440734