PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02647.1.g00070.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 242aa    MW: 26087.8 Da    PI: 10.764
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02647.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.86.8e-30201631128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atk 79 
                                   lppGfrF+Ptdeelv +yL++k+ g +l++++vi+ v d+y ++Pwd+p    +++ e yfF+ r  +     r++    +
  Zpz_sc02647.1.g00070.1.am.mk  20 LPPGFRFKPTDEELVLQYLRRKALGVPLPAADVITVVrDLYGLDPWDIP---GSSDGEKYFFAIRPAAGVDRLRAKTgG-A 96 
                                   79*********************************999***********...4467899*****999887666655531.1 PP

                           NAM  80 ...sgyWkatgkdkevlsk....kgelvglkktLvfy...........kgrapkgektdWvmheyrl 128
                                      sg+Wk  gk+++v+      ++ lvg k+ L+f            +++a  g  t Wvmheyrl
  Zpz_sc02647.1.g00070.1.am.mk  97 mpaSGRWKPEGKERPVVLPrpcgGSLLVGAKRALAFAprrrgkkstnkQASAAAGLTTGWVMHEYRL 163
                                   3459*************9989877778**********9998887776556788888*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-3716190IPR003441NAC domain
PROSITE profilePS5100540.7720190IPR003441NAC domain
PfamPF023657.1E-1921163IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MERAPVLVRH AGGVATLRQL PPGFRFKPTD EELVLQYLRR KALGVPLPAA DVITVVRDLY  60
GLDPWDIPGS SDGEKYFFAI RPAAGVDRLR AKTGGAMPAS GRWKPEGKER PVVLPRPCGG  120
SLLVGAKRAL AFAPRRRGKK STNKQASAAA GLTTGWVMHE YRLATALLHK NGCGLAEAEG  180
EWVVCRVFRR SRQQQQPRRR PAAVPASDGT AQRHTMPPSL SAASSASSCV TDGSDQEEEA  240
SS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-221919614174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02647.1.g00070.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004974022.12e-92NAC domain-containing protein 18
TrEMBLK3YJI94e-91K3YJI9_SETIT; Uncharacterized protein
STRINGSi014408m6e-92(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118183140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-28NAC domain containing protein 47