PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc02765.1.g00100.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 209aa MW: 23219 Da PI: 9.3946

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc02765.1.g00100.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	46.9	8.5e-15	12	147	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat.gkrk 74 f F P+d lv + L++k+ g +++ + + + d+++v P++L + + +++ ++ yfFs+++ +++ +k++ Zpz_sc02765.1.g00100.1.am.mk 12 FMFTPSDRRLV-DILRAKIGGGDFPNAAYFVDDDVCSVRPEELVRkhskparvrsREAGDGRQFYFFSPESFVSTRtKKQR 91 89*******.88*****999888**********73367777554322225568899999876655313333 PP NAM 75 nra....tksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +r+ + W+ g+ k v ++ g + + f+ k ++ k W+m ey+l Zpz_sc02765.1.g00100.1.am.mk 92 KRTidrtSGNECWHGEGSGKLVDG---TNDGYMTKFSFHiKIAGETVAKPGWLMTEYSL 147 343232133567*9877754...567888889999444667777*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	20.155	8	163	IPR003441	NAC domain
SuperFamily	SSF101941	1.83E-20	12	163	IPR003441	NAC domain
Pfam	PF02365	5.6E-11	12	147	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence Send to blast
MDAFPAAEDD SFMFTPSDRR LVDILRAKIG GGDFPNAAYF VDDDVCSVRP EELVRKHSKP 60 ARVRSREAGD GRQFYFFSPE SFVSTRTKKQ RKRTIDRTSG NECWHGEGSG KLVDGTNDGY 120 MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS KAPSSLENKR 180 KAADDLEDAR PSTKERRQDQ IDANGALEG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc02765.1.g00100.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	8e-07	NAC domain containing protein 19