PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02829.1.g00080.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 261aa    MW: 27741.5 Da    PI: 7.1934
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02829.1.g00080.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.22e-134791755
                           AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  r+++ +grW+Ae+r+p++   r r ++g+f t++eAa a++aa  +++g
  Zpz_sc02829.1.g00080.1.sm.mk 47 RRRE-WGRWAAELRVPNT---RERLWIGTFATPKEAAHAYDAAVFCFYG 91
                                  5555.**********944...5*********************998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.11242103IPR001471AP2/ERF domain
SMARTSM003801.0E-1942109IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-1543103IPR016177DNA-binding domain
PRINTSPR003676.5E-64354IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-2144104IPR001471AP2/ERF domain
CDDcd000182.00E-1944105No hitNo description
PfamPF008471.2E-74789IPR001471AP2/ERF domain
PRINTSPR003676.5E-66581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MATAAAASSG SSGAASVGKK ARRRRGGRRS SATATAMPKN LGWVGARRRE WGRWAAELRV  60
PNTRERLWIG TFATPKEAAH AYDAAVFCFY GDNIPRIRRL NFPTAPRPDV PEDVRAKLTV  120
ANIKAIAEKY ARDLADYIPP PPVFLEAAPQ VVEAAPAAVD ASIGDVRAKL TVANIKAIAE  180
KYARDLADYI PPPPVFLEAA PQVVEAAPAA VDASIGVGAA PTADCGSVDE TAVDMSIADC  240
LLSFNDGPVE FDDILNFENI K
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02829.1.g00080.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008666485.16e-42ethylene-responsive transcription factor ERF015
TrEMBLA0A060D1441e-40A0A060D144_MAIZE; AP2-EREBP transcription factor (Fragment)
TrEMBLA0A317Y0941e-40A0A317Y094_MAIZE; Ethylene-responsive transcription factor ERF015
STRINGGRMZM2G033656_P012e-41(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.12e-13ERF family protein