PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc02845.1.g00050.1.sm.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 606aa MW: 67097.6 Da PI: 5.2041

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc02845.1.g00050.1.sm.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	31.2	6.5e-10	78	207	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknra... 77 +d lv + L++k+++++++ + +++ d++++ P++L + + +++ ++yfFs+++ a+ ++++r+ Zpz_sc02845.1.g00050.1.sm.mk 78 SDARLV-DSLRAKIANQEIPHAVYFRDDDVCSLRPEELVRrhgkparvnpREAGDGLQYYFFSPAHFVGASRTKRSRIigg 157 577788.67*******999667**********744677775543222234488*99998888877886455 PP NAM 78 .tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ +W+a + k+v + + L ++ + + +k W+m ey++ Zpz_sc02845.1.g00050.1.sm.mk 158 tEKKETWHAETSLKQVEG--AVDGFMMVKLSYHVKIGEIVQKPGWLMTEYSF 207 444788**999977..666778888988888899********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02365	9.9E-7	13	206	IPR003441	NAC domain
PROSITE profile	PS51005	11.908	69	221	IPR003441	NAC domain
SuperFamily	SSF101941	3.92E-12	78	221	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence Send to blast
MAALGAVADD DSFTFTPSDA RLVDSLRAKI ANQEIPHAVY FRDDDVCSLR PEELVRRHGK 60 PARVNPREAG DGLXXXXSDA RLVDSLRAKI ANQEIPHAVY FRDDDVCSLR PEELVRRHGK 120 PARVNPREAG DGLQYYFFSP AHFVGASRTK RSRIIGGTEK KETWHAETSL KQVEGAVDGF 180 MMVKLSYHVK IGEIVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK 240 AEDDLEGETS SMRQRHENVA APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT 300 GDVHTGFGAL TDGEAIAAYA SGGTVDELIP STMEEVHQPE SEVPPASTDG SMTFEELWQL 360 LDTDVVDDGA YLQLPADEIL AEEWLKDKET LQHVHIDRAA GDAMMFLQRS RPVNPRKRPP 420 PALLSWSTPP RASAPGPVPP TPRVAPPAAS PHDPARAEPP PREATYALCR RCARRIAAAG 480 PRGEADRRAV PDRWLGFIFD TDTFVKKLVE VLSVAPFRLM DMIISLPDTV GIVNCCRCQC 540 QVEVQVPRDM LRLRVQHHAE GDNDLVPYSK TELKLLRKAI EQEAERLEAA DFVQGHEEGT 600 LYLDSN

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence Send to blast

MAALGAVADD DSFTFTPSDA RLVDSLRAKI ANQEIPHAVY FRDDDVCSLR PEELVRRHGK  60
PARVNPREAG DGLXXXXSDA RLVDSLRAKI ANQEIPHAVY FRDDDVCSLR PEELVRRHGK  120
PARVNPREAG DGLQYYFFSP AHFVGASRTK RSRIIGGTEK KETWHAETSL KQVEGAVDGF  180
MMVKLSYHVK IGEIVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK  240
AEDDLEGETS SMRQRHENVA APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT  300
GDVHTGFGAL TDGEAIAAYA SGGTVDELIP STMEEVHQPE SEVPPASTDG SMTFEELWQL  360
LDTDVVDDGA YLQLPADEIL AEEWLKDKET LQHVHIDRAA GDAMMFLQRS RPVNPRKRPP  420
PALLSWSTPP RASAPGPVPP TPRVAPPAAS PHDPARAEPP PREATYALCR RCARRIAAAG  480
PRGEADRRAV PDRWLGFIFD TDTFVKKLVE VLSVAPFRLM DMIISLPDTV GIVNCCRCQC  540
QVEVQVPRDM LRLRVQHHAE GDNDLVPYSK TELKLLRKAI EQEAERLEAA DFVQGHEEGT  600
LYLDSN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc02845.1.g00050.1.sm.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45