PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03117.1.g00040.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 421aa    MW: 45951.3 Da    PI: 6.8806
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03117.1.g00040.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.95.7e-51171451128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lp+GfrFhPtdeel+v+yL ++++  ++++  +i+ev+iy+++PwdLp+k+  +e+ewyfFs+rd+ky++g+r+nra+ +g
  Zpz_sc03117.1.g00040.1.sm.mk  17 LPAGFRFHPTDEELIVHYLMNQAACVPCPV-PIIAEVNIYECNPWDLPRKAVFGENEWYFFSPRDRKYPNGSRPNRAAGNG 96 
                                   799***************************.88***************8777899************************** PP

                           NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatg+dk+v+++  +ge+vg+kk Lvfy gr p+g+ktdW+mheyrl
  Zpz_sc03117.1.g00040.1.sm.mk  97 YWKATGTDKAVVAAasTGETVGVKKALVFYMGRPPRGVKTDWIMHEYRL 145
                                   ************98888999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-619155IPR003441NAC domain
PROSITE profilePS5100556.12817198IPR003441NAC domain
PfamPF023652.2E-2518145IPR003441NAC domain
SuperFamilySSF1019412.88E-61186198IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MANSRSSSSS CRTMPSLPAG FRFHPTDEEL IVHYLMNQAA CVPCPVPIIA EVNIYECNPW  60
DLPRKAVFGE NEWYFFSPRD RKYPNGSRPN RAAGNGYWKA TGTDKAVVAA ASTGETVGVK  120
KALVFYMGRP PRGVKTDWIM HEYRLTVGNG KTTRRAAGSS SSSSSSSMRL LLLARLLHQL  180
RQIDSDLDDW VLCRIHKKSN NFQFSDQEQE GSSIVEEADS SLNNTNMNTN GGAPSPASEQ  240
ASHASDAGDH QFQLPPHLPK SCSLTDLLNT IDCSALSQLL LDAPVEPEPE PQPQQQQGQS  300
PLIYYATPAC PQPQLLKSSL NVSQLQVDAL FSDCSAGYSS HSSGLKRKRS SCDDGSSSRR  360
KLQLLPSEAT FFGSASGYCN QQLAEAASSS GGGFQYSGLL SHPLLNQQQL LLNSHLEMQM  420
Q
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-691620314173Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03117.1.g00040.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025828039.11e-137NAC transcription factor 29-like
TrEMBLA0A2T7CJJ91e-136A0A2T7CJJ9_9POAL; Uncharacterized protein
STRINGOPUNC11G01330.11e-134(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38033775
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-73NAC domain containing protein 25