PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03135.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 425aa    MW: 47485.1 Da    PI: 5.9364
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03135.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.51.7e-12621942128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleev.ikevd.iykvePwdLpkkvka..eekewyfFskrdkkya...tgk 72 
                                    +G+rF+Pt  e+v+++L + ++g+    +++ +  i++++ +y+ eP dL  +++    +++ +fF++  ++++   +  
  Zpz_sc03135.1.g00020.1.am.mk  62 HQGYRFQPTPREVVSRHLPRLIAGELsfmHDAIRPyIHDTNvVYDREPDDLAGMFQPtpATDDRFFFTTVVRQKHrpgSAV 142
                                   68**********************9966533333349999637888*****853333225557899988777666223355 PP

                           NAM  73 rknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   r  r+++ g W  + +  +v+++ ++ ++g  + L +     ++g  td +m+ey+ 
  Zpz_sc03135.1.g00020.1.am.mk 143 RYVRVADPGSWAVQRT-IDVMDEaGTVKIGELRRLRYR----KNGAYTDCLMEEYSC 194
                                   8888999****98866.56666548888********97....78899********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-1558216IPR003441NAC domain
PROSITE profilePS5100518.98461216IPR003441NAC domain
PfamPF023655.0E-763193IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MRAREEDEAG QTREASPRVK AKRRAERGRG DPSCDLRDVR RLDRGFPRME TPPPIEEESA  60
LHQGYRFQPT PREVVSRHLP RLIAGELSFM HDAIRPYIHD TNVVYDREPD DLAGMFQPTP  120
ATDDRFFFTT VVRQKHRPGS AVRYVRVADP GSWAVQRTID VMDEAGTVKI GELRRLRYRK  180
NGAYTDCLME EYSCACSVKD AVDGDNERVF CRIYQEETTA ADPQRGDQQE EAAAAEPQVA  240
EPQADPLCSR RPDQSASTGR LHHEVDAAIT IPAPVSRLPV PFVSPDPLQS TEDAVDDDFD  300
EFFDKLDTML AASRYSTLSL VAAAGAVASS SLTSDARARA AGRRELPWTF TIACLLMDSP  360
AQTFRARQSV DDFVDCTGRL LAVSPPGQAH YSSSTQARTP RPVRNLPRRI TSCKRFNYAE  420
LLSAP
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03135.1.g00020.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.23e-08NAC 014