PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03349.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 696aa    MW: 75012.1 Da    PI: 10.3656
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03349.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-18426476155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  Zpz_sc03349.1.g00010.1.am.mk 426 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 476
                                   57*****887.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.7E-13426476IPR001471AP2/ERF domain
CDDcd000182.86E-29426485No hitNo description
Gene3DG3DSA:3.30.730.104.5E-32427485IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-21427485IPR016177DNA-binding domain
SMARTSM003805.0E-37427490IPR001471AP2/ERF domain
PROSITE profilePS5103224.118427484IPR001471AP2/ERF domain
PRINTSPR003673.1E-10428439IPR001471AP2/ERF domain
PRINTSPR003673.1E-10450466IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 696 aa     Download sequence    Send to blast
MRCVPVRLLA QFGVAERAVD WAIKVSQQCV CFADGTDQPP RTSVLVARRL VLAVEKSARR  60
SEATPSLANA NAVDLTAPAS LAATSDPSLS ARAPQAPRSR GSSGKPARAR RPRRGEGQRV  120
KRARNRSLER VARTLFCAVL PVTVRNSCGA RTRRVGHKDG NSRWEPWPNF IIIIIFPTTL  180
LRPSEELAHL NEDKSNAKPD ETQPNLGSGI AERVATGFRR TRRAGRDLSS STPSPPFVGR  240
LGARAIRRPA GSHNLLRRAG AFSVLRAAAP PLASGDLPIS HRHSVANEPY RVDQLNRHYL  300
YSWAHSTSSH FPLTLSGKGA MESVASHAPT TSSSSSSSSY CSLVNGGPEE LSKKNPKPTT  360
KRKRDASPHC CQLEVEANNA TVVPNGHGEE SSSCCSTDDH AGSGDNNNNQ APAASSATRR  420
SGFKHPSYRG VRRRSWGKWV SEIREPRKKS RIWLGTFPTA EMAARAHDVA ALAIKGRAAH  480
LNFPDRAHEL PRPASTSPAD IQAAAAQAAA TAQCDAASSS AELPSSPAAE SAETAGPETV  540
RADSNGAQEH ALFDLPDLLL DLRDGLWWSP VWPGPEAMAA EEYDVVGMQE PLLWIEDLGR  600
ANPTGTHTAM RGDDDRLTWP EGQEGVDRSI TMPLLPVAQR REPCLLSISR ADALAGLSIG  660
GARTPPTHDY VKCTTGRPDR RLPGSPVAAW SSRDRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-17419484672Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03349.1.g00010.1.am.mk
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM5761311e-113KM576131.1 Oryza rufipogon dehydration responsive element binding protein 4-2 (DREB4-2) gene, promoter region and complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.14e-36ERF family protein