PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03358.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 261aa    MW: 28505.3 Da    PI: 7.137
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03358.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.71.8e-13101322128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvka..eekewyfFskrdkkyat...gkrkn 75 
                                    pG+rF+Pt  +++ +yL + ++g + +++ +  i +++iy+ eP  L +k++    +++ +fF+   +++++     r  
  Zpz_sc03358.1.g00010.1.am.mk  10 CPGIRFQPTPRDVLAHYLPRLIAGVPvHPAIRPlIYTTNIYTDEPGVLARKFHPtpVKDDRFFFTAVVRQNHSpgiAVRYV 90 
                                   79************************633334459*************854433223447899998888777521245888 PP

                           NAM  76 ratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   r++  g W  + +          ++g  + L++   r+++g+ tdW+m+ey+ 
  Zpz_sc03358.1.g00010.1.am.mk  91 RVAGPGSWALQRTR--------VKIGELRRLMY---RKNHGVYTDWLMEEYSC 132
                                   88899999977653........34567788888...58999**********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.06E-195154IPR003441NAC domain
PROSITE profilePS5100518.939154IPR003441NAC domain
PfamPF023652.1E-911131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MARPNESALC PGIRFQPTPR DVLAHYLPRL IAGVPVHPAI RPLIYTTNIY TDEPGVLARK  60
FHPTPVKDDR FFFTAVVRQN HSPGIAVRYV RVAGPGSWAL QRTRVKIGEL RRLMYRKNHG  120
VYTDWLMEEY SCACSVREAV VGDKERVFCR IYVSPNAATD NNKPPPLIID AATPPPQILA  180
SPSSKRIEAA PESSIGGASS PTSPRPCTPR PPCSPAHGSP CPAEEEETAT GPDQNPAAAV  240
DDDLINNFKA SLPADADEHD E
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03358.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-11NAC domain containing protein 2