PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03378.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 293aa    MW: 32335.7 Da    PI: 7.3551
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03378.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY25.23.3e-0849922059
                                  S-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
                          WRKY 20 fprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59
                                    + YYrCt++   +C ++k+v+++ ++dp ++ +tY ++H+++
  Zpz_sc03378.1.g00030.1.am.mk 49 WRKFYYRCTYKnemKCAATKQVQQKdTSDPPLFSVTYFNHHTCS 92
                                  4567******99999*******876157**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.6E-83492IPR003657WRKY domain
SuperFamilySSF1182901.83E-123693IPR003657WRKY domain
SMARTSM007742.2E-154393IPR003657WRKY domain
PfamPF031065.6E-104691IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MALDSVPLYP GGDLASSRAT SRAHQQRIRK DERSWTTETY APYDDGHQWR KFYYRCTYKN  60
EMKCAATKQV QQKDTSDPPL FSVTYFNHHT CSTSSGPMGR GSYTRDATVQ SSPKKAVSIF  120
FSSHSSSEQP TFLTSAVTPA SPNTQSYRAN QQLDRSAYAG RQFQWPRTSS PGSNGLLKME  180
IDNFSEASAS SSSSGVLSRT LLPIGQSRCI EYFHFFDSQQ DRCCGYWVVC ACVRGDLVQG  240
ARVEPTCPQV IAADADDASS AADADDASSA WWSSELLIGW SRVPAAAREQ VIC
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03378.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025827915.11e-92probable WRKY transcription factor 46 isoform X1
TrEMBLA0A1E5W2954e-95A0A1E5W295_9POAL; Uncharacterized protein
TrEMBLA0A3L6R8805e-95A0A3L6R880_PANMI; Putative WRKY transcription factor 48
STRINGPavir.J31578.1.p1e-92(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.14e-12WRKY DNA-binding protein 46