PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc03455.1.g00090.1.sm.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 178aa MW: 19683.6 Da PI: 9.6871

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc03455.1.g00090.1.sm.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.9	8e-12	78	130	2	54
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++++r rrk++NR++A+rsR+RK++++eeL+ ++ L ae + +l +l Zpz_sc03455.1.g00090.1.sm.mk 78 EDWRRKRRKISNRLSAQRSRARKQQQLEELRATAARLRAEKEGFEARLRTLAR 130 79****************************************99999988875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.1E-10	74	131	No hit	No description
SMART	SM00338	1.5E-10	77	141	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.9E-8	78	132	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.438	79	142	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.37E-7	80	135	No hit	No description
CDD	cd14702	3.43E-14	82	131	No hit	No description
PROSITE pattern	PS00036	0	84	99	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence Send to blast
MLSLQEALGH DTLVAPSCCG GLRDHDIITS GFTPWGPESC PTLDQVLMMA ASSATPSPPG 60 QELDGSMDAV ITADDDDEDW RRKRRKISNR LSAQRSRARK QQQLEELRAT AARLRAEKEG 120 FEARLRTLAR HDVALRCQNA RLRAEAAALS RRLLALQRLA RLQVVAPRPM MGLASLMT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc03455.1.g00090.1.sm.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008665488.1	2e-46	ocs element-binding factor 1-like
TrEMBL	A0A1D6L661	4e-45	A0A1D6L661_MAIZE; Ocs element-binding factor 1
STRING	GRMZM2G177046_P01	6e-46	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13845	24	29