PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03578.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 279aa    MW: 31056.9 Da    PI: 6.5183
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03578.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.63.1e-1671474128
                           NAM   4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 
                                    f F P++  l+++yL+kk++g +    l  +  +++ d++++ P+ L +          + +++ ++ yfF+k++   ++
  Zpz_sc03578.1.g00050.1.am.mk   7 SFSFCPSNALLINHYLRKKIDGAEvfsnLANAAYFHDEDVCSARPEVLVRahtmparvpsREAGDGQQFYFFTKARFIGNK 87 
                                   589*********************8865333345**************744677776654322355577888887755554 PP

                           NAM  71 gkrknratk....sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                    + ++r++k    + +W+a g+ k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zpz_sc03578.1.g00050.1.am.mk  88 LNMRSRTIKnagdKETWHAEGSAKPVDG---TAEGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 147
                                   3434443222223778*********965...67899999****66555515799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.8014163IPR003441NAC domain
SuperFamilySSF1019412.75E-227163IPR003441NAC domain
PfamPF023655.9E-128146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAAMDDSFSF CPSNALLINH YLRKKIDGAE VFSNLANAAY FHDEDVCSAR PEVLVRAHTM  60
PARVPSREAG DGQQFYFFTK ARFIGNKLNM RSRTIKNAGD KETWHAEGSA KPVDGTAEGY  120
MTKLSYHVKT GPKTVEKPGW IMTEYSFKDT KEGDLVLCKI YKSPRGPGRS KAPSLPAMSD  180
RKRKVADDLE EATPSTRPRQ IDENHQHAAV PEFGAERSQT QAMPASLDSN SALEDIDWSW  240
FMPESEAERS QPHLAKPASL GSNVTLEDIE LYAKLLLAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03578.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.12e-09NTM1-like 8