PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03671.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 714aa    MW: 79334.5 Da    PI: 9.3905
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03671.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.11.2e-51201501129
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrFhP+dee++++yL +kv ++++++  +i+e+di+++ePw+Lp+k+k +ekewyf++ +d+ky++g+r nrat++g
  Zpz_sc03671.1.g00030.1.am.mk  20 LPPGFRFHPSDEEIITFYLMPKVLNSNFTA-VAIAEADINNSEPWELPRKAKMGEKEWYFYCLKDHKYQKGERINRATNAG 99 
                                   79*************************999.67***************99999**************************** PP

                           NAM  82 yWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrle 129
                                   +Wkatgkdke++++     ++vg+kktLvfy+grap+gekt+W+mheyrle
  Zpz_sc03671.1.g00030.1.am.mk 100 FWKATGKDKEIYQAssmMPAVVGMKKTLVFYTGRAPRGEKTEWIMHEYRLE 150
                                   *************84444445****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-5417157IPR003441NAC domain
PROSITE profilePS5100550.36620173IPR003441NAC domain
PfamPF023651.7E-2521149IPR003441NAC domain
Gene3DG3DSA:1.10.630.108.5E-99245711IPR001128Cytochrome P450
SuperFamilySSF482642.62E-102257711IPR001128Cytochrome P450
PfamPF000676.7E-65260691IPR001128Cytochrome P450
PRINTSPR004631.1E-14292311IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.1E-14501518IPR002401Cytochrome P450, E-class, group I
PRINTSPR003853.3E-7512529IPR001128Cytochrome P450
PRINTSPR004631.1E-14521547IPR002401Cytochrome P450, E-class, group I
PRINTSPR003853.3E-7568579IPR001128Cytochrome P450
PRINTSPR004631.1E-14607631IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.1E-14650660IPR002401Cytochrome P450, E-class, group I
PRINTSPR003853.3E-7651660IPR001128Cytochrome P450
PROSITE patternPS000860653662IPR017972Cytochrome P450, conserved site
PRINTSPR004631.1E-14660683IPR002401Cytochrome P450, E-class, group I
PRINTSPR003853.3E-7660671IPR001128Cytochrome P450
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0005506Molecular Functioniron ion binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    Send to blast
MGDHKYEGIR GTVDDAGLNL PPGFRFHPSD EEIITFYLMP KVLNSNFTAV AIAEADINNS  60
EPWELPRKAK MGEKEWYFYC LKDHKYQKGE RINRATNAGF WKATGKDKEI YQASSMMPAV  120
VGMKKTLVFY TGRAPRGEKT EWIMHEYRLE GSSKLGCPST SSNISKSCNP ANFQQVDTDN  180
IDGSATNAVG SFRGISEVPR PRDILSFTTS KSSEGVWSKA LARSPPMDFS LLLALVAIAL  240
PVILHLVTRA KNPRPAARLP PGSLGVPVIG QSLGLLRAMR NNTAERWIKD QVDRYGPVSK  300
LSLFGTPTVL VTGPAANKFV FFSDALAMRQ PRSVQRILGE RSILDLCGAD HKRIRGALVE  360
FLKPDMLRMY VGKIDGEVRR HVDECWSGRA TVTVMPLMKR LTFDIISPLL FGLERGALRD  420
ALANDFAGIM EGMWSVPVNL PFTAFSRSLK ASARARRLLT RITRETEAKL ERGEATRSSD  480
LIACLLSMTD DSGARLLSEE EIVDTSMVAL VAGHDTSSIL ITFMVRHLAN DPDTLAAMVQ  540
EHDEIAKSKN KGEALTWDDL AKMKFTWRVA LETLRLVPPI FGNFRTAVKD IEFGGYTIPA  600
GWQVFWTAPV THTDAAIFPD PAKFDPSRFE SHQPSAAATT AKAKAPPFSF VAFGGGPRIC  660
VGMEFARIET LVTMHHLVRR FQWRLCCKKD TFARDPMPSP LHGLPVEIEQ RTCH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6a17_A1e-672477141455Cytochrome P450 90B1
6a18_A1e-672477141455Cytochrome P450 90B1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1453460RARRLLTR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03671.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001148166.20.0taxane 13-alpha-hydroxylase precursor
TrEMBLA0A2T7EWQ30.0A0A2T7EWQ3_9POAL; Uncharacterized protein
STRINGGRMZM2G180082_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G29035.12e-63NAC domain containing protein 3