PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03692.1.g00060.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 238aa    MW: 26190.3 Da    PI: 6.795
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03692.1.g00060.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.34.9e-09121092108
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdL.pkkvkaeekewyfFskrdkkyatgkrknratks 80 
                                   ppG+ F+Ptdeel++ yL ++++++   l  v i++    +++Pw+L p              +r  ++    r +r    
  Zpz_sc03692.1.g00060.1.sm.mk  12 PPGLIFDPTDEELIMLYLLPRTRDQADALPGViIDDDAAANAQPWKLfP--------------ERPPHA---PRGRRCDGG 75 
                                   8*************************888777588888999******32..............222222...244444455 PP

                           NAM  81 gyWkatgkdkevlsk......kgelvglkktLvf 108
                                   g Wk + + ++  ++      +++  ++k+ L +
  Zpz_sc03692.1.g00060.1.sm.mk  76 GSWKIQKRRRKDAARhvlrvgGESIRWTKNKLKL 109
                                   5555444433333222333333333445555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.15E-1510139IPR003441NAC domain
PROSITE profilePS5100513.96111168IPR003441NAC domain
PfamPF023651.7E-812123IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MLVAKLFGDD HPPGLIFDPT DEELIMLYLL PRTRDQADAL PGVIIDDDAA ANAQPWKLFP  60
ERPPHAPRGR RCDGGGSWKI QKRRRKDAAR HVLRVGGESI RWTKNKLKLS VGTGTTTGWV  120
RQEHFVDDLP SLRVCRISFA GRGEKRPRLQ PDDSSVPGEP VTRRLRVVAA AADSGSANCT  180
TTSLDHQKPG TADASEGQER RQSALGVAAM PNQEIQDSFG KIQEFTDALE DDEEPHGS
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03692.1.g00060.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.26e-08NAC domain containing protein 41