PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04236.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 238aa    MW: 26570.3 Da    PI: 6.0655
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04236.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.65.5e-11128102129
                           NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
                                   ++ktLvfy+grap+g+++dW+mheyrle
  Zpz_sc04236.1.g00040.1.am.mk   1 MRKTLVFYRGRAPNGHNSDWIMHEYRLE 28 
                                   89************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-14148IPR003441NAC domain
PROSITE profilePS5100520.803148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MRKTLVFYRG RAPNGHNSDW IMHEYRLETS ENATAPEEGW VVCRVCKKRV ATVQRMSESP  60
PCWFDDHSAG FMPALGSPRQ LLQHHRNTSA AYVGQHQPLY HCKPELEYHH LLPSQEAFLP  120
QLPQLESPNS KPPVYIGHGS GSSLQSSEHS RYTPQQQTMA SAAYMAAVDD SATDWSVLDK  180
FVASQLFSHG DSTSKEPSYS SPVPAFQLTE SNNQEETQDL VDYASTSASG GDQADLWK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04236.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825485.11e-107NAC domain-containing protein 7-like
TrEMBLA0A2T7F9P21e-108A0A2T7F9P2_9POAL; Uncharacterized protein
STRINGPavir.J39804.1.p1e-107(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23703892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.14e-43NAC 007