PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04244.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 387aa    MW: 43057.6 Da    PI: 9.5431
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04244.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.4e-08260304554
                                   HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   h +rEr+RR+++ ++++ L  ++  +      K +K +i++ A  YI++L
  Zpz_sc04244.1.g00040.1.am.mk 260 HMMRERQRREKLSQSYADLHAMVAAR-----SKGDKNSIVQSAAIYIHEL 304
                                   889**********************7.....6999999*********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.45E-12255325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.725255304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.32E-8259309No hitNo description
Gene3DG3DSA:4.10.280.101.5E-9259322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-6260304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-5261310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
LNAAWAWSHS LVFPRRHPFL PIGVPQGEHA EERGVSWDCP RPRRDYLWTG LERTAALSPS  60
IDHARASATT KGLIGLALNV RARTYVEYLA ESRGRSNRMV AGTSSYGECE RALEIFQLDR  120
LRGTFDLAPH LTCAPPDSIA GDNQTSPLAT PGPPRQRRLL ARSRREMQMD VGAPYFYAGF  180
HDEIPCFYPH GFAPAASPEL LPFGFDSTSP LLEQPGAPEL QTSGTAPQGS TWTNVKTREE  240
EEGRRRQPAG AVESSRGFRH MMRERQRREK LSQSYADLHA MVAARSKGDK NSIVQSAAIY  300
IHELKGAREQ LRRRNEELKA RILGHDARQP SVKVDFEVDD PASGTDCMIG ALRRLRSMGV  360
KARGIRSSMS GGKLWTEMNV ETTVSDP
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04244.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022678746.19e-83transcription factor BHLH148-like isoform X2
TrEMBLA0A368SEV06e-82A0A368SEV0_SETIT; Uncharacterized protein
STRINGSi036716m1e-81(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59403450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-21bHLH family protein