PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04642.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 736aa    MW: 80082.1 Da    PI: 7.0883
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04642.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.11.5e-184916212127
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknr 76 
                                   ppG+ F+Ptdeel+ +yL ++  gk+  ++ v +++ +  +++Pw+L +    ++  +++   +f+++ ++     +r++r
  Zpz_sc04642.1.g00030.1.am.mk 491 PPGLIFDPTDEELIEHYLLPRSLGKPEAFSVViVEDNKAANTQPWKLFQnhdlMALIDDHlPAFFYVRDERP--DARRSRR 569
                                   8*************************777666356669*********6334542222444355777777664..5679999 PP

                           NAM  77 atksgyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                       g Wk + +    d++vl   ++++ ++++ L ++  +     +  Wvmhe+ 
  Zpz_sc04642.1.g00030.1.am.mk 570 CEGGGWWKIQKSeskdDRHVLIVgGRKVRWTRNNLNLHLDSG----SVGWVMHEFF 621
                                   999999*966542333566666556777899*******5443....568*****96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF127961.8E-1125101IPR020683Ankyrin repeat-containing domain
CDDcd002041.31E-1433206No hitNo description
SuperFamilySSF484031.16E-3133300IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.204.9E-3434276IPR020683Ankyrin repeat-containing domain
SMARTSM002480.243867IPR002110Ankyrin repeat
PROSITE profilePS500889.0843860IPR002110Ankyrin repeat
PROSITE profilePS5029732.91738280IPR020683Ankyrin repeat-containing domain
SMARTSM002480.3376105IPR002110Ankyrin repeat
SMARTSM0024880143180IPR002110Ankyrin repeat
CDDcd002042.13E-16143273No hitNo description
PfamPF127962.9E-7166238IPR020683Ankyrin repeat-containing domain
SMARTSM002486.1185214IPR002110Ankyrin repeat
SMARTSM002482300219247IPR002110Ankyrin repeat
SMARTSM00248610259288IPR002110Ankyrin repeat
PfamPF139623.9E-7283355IPR026961PGG domain
SuperFamilySSF1019411.7E-22483627IPR003441NAC domain
PROSITE profilePS5100522.963490653IPR003441NAC domain
PfamPF023651.0E-13491620IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    Send to blast
GSVLHVVAAG GEDDAFLTGA TEIYGKAKHL LADSCDAKGD TPLHCAARSG SVKMLSSLVD  60
LAGSRVQTAL RKRNRSGETV LHEAVRWANE EMVRVLVSAD VGLARVPRGN SASPLYLDIL  120
LGHDGIAELL HAMDDRLSYS GPDGQNALHV AVLRSETSRN SPMSPTVAKL LLEADESSAY  180
QSDNNGSFPI HAAASGKNTD FIRVLLQRCP DCAQLRDGRG RTFLHIAVEN DPAPFRSLLP  240
LKGNQVRRFA AILNAQDDEG STVLHLAVKA GRPLTIYPLI PPKGTPELAK KYSFEAFLIA  300
NNLALLCATM ATISLMYAGV SIVDINTRMI AFFTSIFFLN SSGRSLAAAF VFGTQAVLAP  360
IDHAASVVTW LATGLILLDI AWFTCNICLE HIVLKNRLGT KAYIRAACSL VSLPLGALWP  420
YVVVGKGHRL GLVARSSYAY RPGRNRARPP PRHPGAALPP HPIIRDQPRG TGHVNTRHTM  480
SPAKCLGDDH PPGLIFDPTD EELIEHYLLP RSLGKPEAFS VVIVEDNKAA NTQPWKLFQN  540
HDLMALIDDH LPAFFYVRDE RPDARRSRRC EGGGWWKIQK SESKDDRHVL IVGGRKVRWT  600
RNNLNLHLDS GSVGWVMHEF FIDDHPLLKP DGHAHDDASL GGEQPVTQRL RVTAAAGSSS  660
ADSTTTTTSL DQNLGTAHAS EDQEHPSASA MPMPIHNSRA DLDPVNIIYD GEFQALLATA  720
DAAMAPFRVL FNHDEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5vkq_A3e-11413008651117No mechanoreceptor potential C isoform L
5vkq_B3e-11413008651117No mechanoreceptor potential C isoform L
5vkq_C3e-11413008651117No mechanoreceptor potential C isoform L
5vkq_D3e-11413008651117No mechanoreceptor potential C isoform L
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04642.1.g00030.1.am.mk
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003562102.21e-74protein ACCELERATED CELL DEATH 6
TrEMBLA0A2K2DVC23e-73A0A2K2DVC2_BRADI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-07NAC domain containing protein 2