PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04699.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HB-other
Protein Properties Length: 419aa    MW: 47124.7 Da    PI: 10.6701
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04699.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.98.1e-09375419246
                                   T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHH CS
                      Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkv 46 
                                   rk+ ++tkeq + Le  F++++ +s++++ eLA++++Lt rqV v
  Zpz_sc04699.1.g00010.1.am.mk 375 RKKLRLTKEQSTLLEGTFRSHNILSHAQKHELARRVNLTPRQVEV 419
                                   788899*************************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003321.4E-41116IPR001932PPM-type phosphatase domain
PROSITE profilePS5174631.5351118IPR001932PPM-type phosphatase domain
CDDcd001435.69E-471118No hitNo description
Gene3DG3DSA:3.60.40.106.2E-442121IPR001932PPM-type phosphatase domain
SuperFamilySSF816067.06E-382118IPR001932PPM-type phosphatase domain
PfamPF004811.6E-352111IPR001932PPM-type phosphatase domain
Gene3DG3DSA:1.10.10.602.7E-9355418IPR009057Homeodomain-like
SuperFamilySSF466895.56E-9357419IPR009057Homeodomain-like
PROSITE profilePS500719.831371419IPR001356Homeobox domain
PfamPF000463.3E-6375419IPR001356Homeobox domain
CDDcd000863.07E-5375419No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0003824Molecular Functioncatalytic activity
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
IAVSRDHKPD QTDERQRIED AGGFVMWAGG VLAVSRAFGD KLLKQYVVAD PEIKEEKVDS  60
SLEFLILASD GLWDVVTNEE AVAMVKPIID SEQAAKKLLQ EASQRGSADN ITCVVVRFLD  120
ETNGPSKAVA GQQASSKDFR NRHEKAKGIT KKNEENKPKR EEKTAGKSAT RARASATKLA  180
ARAAGLEWNP WRWRWRWRWR RNPRRRWWQQ QGPRRGRENR QTDDCLRTTP LRARTGACSS  240
VNATRVPVAG HSLHYRRRLL ERPSHGFPSS AAAASRLLAC SCCDCDWHSW TVRDTRIGGG  300
CSPSRSHGER WSSVQFDKQE EIGGRDHKQA ENKKSDNKSS TRKRSAKAID DDARSPSRGP  360
SPSEDAQDGS DGGTRKKLRL TKEQSTLLEG TFRSHNILSH AQKHELARRV NLTPRQVEV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zcg_A9e-211116175318Probable protein phosphatase 2C 50
5zcg_B9e-211116175318Probable protein phosphatase 2C 50
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1255262RRRLLERP
2373379TRKKLRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04699.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.12e-13homeobox from Arabidopsis thaliana