PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04910.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 665aa    MW: 72514.1 Da    PI: 10.0791
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04910.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.4e-18210259255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +ykGVr++k +grWvAeIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  Zpz_sc04910.1.g00020.1.am.mk 210 RYKGVRRRK-WGRWVAEIRLPNS---RDRIWLGSYDTPEKAARAFDAAFVCLRG 259
                                   7*****998.**********933...5*********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd003208.29E-13155IPR020818GroES chaperonin family
PfamPF001661.2E-8155IPR020818GroES chaperonin family
SuperFamilySSF501297.06E-8154IPR011032GroES-like
Gene3DG3DSA:2.30.33.401.6E-11154IPR020818GroES chaperonin family
Gene3DG3DSA:3.30.730.101.9E-26210270IPR001471AP2/ERF domain
CDDcd000183.27E-24210271No hitNo description
PfamPF008472.1E-11210258IPR001471AP2/ERF domain
SMARTSM003804.6E-30210275IPR001471AP2/ERF domain
PROSITE profilePS5103222.708210269IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-18210270IPR016177DNA-binding domain
PRINTSPR003672.4E-8211222IPR001471AP2/ERF domain
PRINTSPR003672.4E-8233249IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006457Biological Processprotein folding
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 665 aa     Download sequence    Send to blast
VVAVGPGPLD EEGKRQPLSV PTNSTVLYSK YAGSEFKGAD GTGYIVLKAS DVHTVKFRKA  60
GAVADRPINV PLGSVTAHAT HPFYRAWPAG VNLPPDRSTY GRNEAREAAS VEPPRVHGVR  120
NEPMWPRKPC YYELPKCQGY PVVPTSREGS LPPIKQPPAL RVQLPPHTQS VADVRSRAEL  180
MPPPYDRMLT SPQEQEHQHA RLPSSGDVRR YKGVRRRKWG RWVAEIRLPN SRDRIWLGSY  240
DTPEKAARAF DAAFVCLRGP GAADGLNFPS SPPAVARTSD VDEVYAVAVS YGNNHDIAMV  300
AREEAAVDPP PPRDSMLPAD NNVAAAAVPP RQLQVSTERL DCWSEFVNNP PPLYSPTWTG  360
SHEHLLPVPS CPRVTWPDPA CLALLQASSS PPRLLSWSEA ASPPLLPSLG LVLSSRSRPR  420
VIWPKPASTL LPASSTPRLV RAHLASAAPK SRPPPLLPSG DPESCKALSR RWLRATRTRD  480
ERTWSITGPH LEGAGHGIKH GWSRRSAAAT ATSSVLRAGG SNMRTRTRGR RRSNQALSIA  540
TRSMAAASGR MAVGVDEPEA ITEEEEGRAL MQWRWRRVHI GTDQTEGFGL ASIRLGGSEA  600
WRRSEYAKRS ASLLEPFVQE ELLDGNGQPC GARALGVMAC PDAHHDMHSL PCGPRRALQG  660
SELNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211217KGVRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04910.1.g00020.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-29ERF family protein