PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc05095.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WOX
Protein Properties Length: 216aa    MW: 24211.4 Da    PI: 11.1832
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc05095.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.91.2e-061852014056
                                   -HHHHHHHHHHHHHHHH CS
                      Homeobox  40 terqVkvWFqNrRakek 56 
                                    +++V++WFqNr+ + k
  Zpz_sc05095.1.g00010.1.am.mk 185 GDANVFYWFQNRKSRTK 201
                                   579************99 PP
2Wus_type_Homeobox414.5e-141792034064
             Wus_type_Homeobox  40 eeyGkiedkNVfyWFQNrkaRerqk 64 
                                   +eyG ++d+NVfyWFQNrk+R ++k
  Zpz_sc05095.1.g00010.1.am.mk 179 REYGPVGDANVFYWFQNRKSRTKHK 203
                                   69*********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MRANTHGHAP VFPLRHSSIC DITFTRRSAR QLRRLEYCDS TSVVAPITAN KKPSTRPCVR  60
ACADELRRLA RSWEKPTDPT GPYTIQHSIS FLFTVSPVTT HEHRPIDRAV STSNSNLAAG  120
KKGTRGSFDR WITGRAARHW PSMYRSSLAC NIQQPQPDMN NGVGGKSSLM SSILEYVSRE  180
YGPVGDANVF YWFQNRKSRT KHKLRAAGQL QPASGR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc05095.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4902425e-38AM490242.1 Zea mays mRNA for putative wuschel homeobox protein (wox9C gene).
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26663470
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33880.12e-11homeobox-3