PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc05126.1.g00010.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CPP
Protein Properties Length: 324aa    MW: 35242 Da    PI: 7.2712
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc05126.1.g00010.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR49.67.7e-16108145340
                             TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                                     +k+C+CkkskClk+YC Cfa+g++C+e+C Ce C+Nk 
  Zpz_sc05126.1.g00010.1.sm.mkhc 108 SKSCSCKKSKCLKLYCVCFASGTHCTESCGCEPCHNKP 145
                                     699*********************************96 PP
2TCR30.76.1e-10181201424
                             TCR   4 kgCnCkkskClkkYCeCfaag 24 
                                     ++CnCkks ClkkYC+C++  
  Zpz_sc05126.1.g00010.1.sm.mkhc 181 RKCNCKKSGCLKKYCDCYQGV 201
                                     79****************965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011149.5E-11106147IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163419.568107221IPR005172CRC domain
PfamPF036383.5E-12109144IPR005172CRC domain
SMARTSM011140.05180208IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.2E-6181200IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MEPAPDPQVA EDVPEALEPE PAGSDPDDAE RAVPPPPPPA PAPTPAPAPI PPTAASDATP  60
GPESFVPAAG LPPPQAEATG SFDRRKKSAT PPTLSFPFRR RTEDGDGSKS CSCKKSKCLK  120
LYCVCFASGT HCTESCGCEP CHNKPGSAIA PVLPLKFAQT SEAGQDLVEL PLRSPMDIFR  180
RKCNCKKSGC LKKYCDCYQG VQSTVSARIV RTRLGEKETQ VGVEIQTMNG HLYPKPLTQV  240
RPESSSFQLT RRPGEEVRGE QWHFSRKPSE DGISDAIEGH NVIKFQRNNK KPERHMDRFS  300
IPRCIEVMNA MSELSLIEKS LAPD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc05126.1.g00010.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004963115.11e-100protein tesmin/TSO1-like CXC 7
TrEMBLK3Z6R92e-98K3Z6R9_SETIT; Uncharacterized protein
STRINGSi022238m3e-99(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP96102834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.11e-14TESMIN/TSO1-like CXC 2