PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc05572.1.g00020.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 508aa    MW: 55006.7 Da    PI: 10.6957
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc05572.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57394.41.2e-29260357297
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 
                                   +++rlws  De+v+L+Gl  ++ak+g+   +++di++++  + +++s+kv+++ql++K+rrLK+K+++  +++k+g++p+f
  Zpz_sc05572.1.g00020.1.am.mk 260 RPSRLWSTGDELVILRGLAAYRAKHGVlpGSMHDISKLHGRIGNELSVKVTTTQLSDKVRRLKQKYHQLATRTKNGRDPDF 340
                                   679************************877888************************************************ PP

                        DUF573  81 skehdqkifelskkiWg 97 
                                    +++d++++el kk+Wg
  Zpz_sc05572.1.g00020.1.am.mk 341 PTPQDHSVYELGKKVWG 357
                                   ****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.6E-27262357IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    Send to blast
LGDSALSLQR STEAIAASRG QAWGAPRPSS RACAAPSLPF GHARRTPGPR GTNSAHGHPS  60
LTPPLKNQEY RPSPPFAFHG TEAPGRGCSV RVRIRGLRRR DGRVHPSSPS ASKTPPSNPN  120
PKPAPAAEDS AAAGSDSGAA YDSDADHRPA PPKPAASPSR RAARRSPKPR SRSPTPGANS  180
DSDGSAAPVA SEADPAADSE DVNASPLPPP RSSRAEAVIV KPLSSRPMDP PRRSVPSFSE  240
PRPKRPRSAA VPAVMEQLKR PSRLWSTGDE LVILRGLAAY RAKHGVLPGS MHDISKLHGR  300
IGNELSVKVT TTQLSDKVRR LKQKYHQLAT RTKNGRDPDF PTPQDHSVYE LGKKVWGAID  360
GAGGGVIAEY ENAGAGYSEE ERQNVESDEN MDSGRDDRER KNKRLKPIAL ANGYGTRFGA  420
TSASSRGKIE FEKGKDAYPY LWETVEDLSR QHPNGVAFKK AFEMIEGPKA RAMEEKLRKF  480
RVTEVRHQLR RMELMKETVK MVLDALEG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc05572.1.g00020.1.am.mk
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001144670.11e-165GLABROUS1 enhancer-binding protein-like
TrEMBLA0A3L6TCP41e-180A0A3L6TCP4_PANMI; Uncharacterized protein
STRINGGRMZM2G134866_P021e-165(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.13e-13DNA-binding storekeeper protein-related transcriptional regulator