PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc05588.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 189aa    MW: 20600.5 Da    PI: 11.7261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc05588.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.1e-16124171456
                           AP2   4 kGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   +GVr++   g+Wv+eIr+       +  r++lg++ t+e+Aa+a++aa+++l+g+
  Zpz_sc05588.1.g00010.1.am.mk 124 RGVRFR--AGKWVSEIRElR-----KpSRIWLGTYPTPEMAAAAYDAAALALRGA 171
                                   8***96..5*********66.....68*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.531116178IPR001471AP2/ERF domain
SuperFamilySSF541713.92E-17123179IPR016177DNA-binding domain
SMARTSM003803.3E-21124184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-23124179IPR001471AP2/ERF domain
PfamPF008472.2E-10124170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MRPSTKFCWS YQRCELPSSA FRHLDRPATT IDRVPVTSSC TSRTKRLFRR PPIAPVTPLD  60
VDVASLRGPA VQKPDERVAG SFTRSFPSVE RAGNAFRQVT FARNDLTNSD GFPTAGRVGV  120
RAARGVRFRA GKWVSEIREL RKPSRIWLGT YPTPEMAAAA YDAAALALRG AGAALNFPDA  180
ARALPAPAS
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc05588.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.15e-13ERF family protein