PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc06279.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 166aa    MW: 18335.9 Da    PI: 10.0396
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc06279.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.8e-18119166148
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 
                                   lp GfrFhPtdeelv +yLk k++g+ +++ evi+e+d++k+ePwdLp
  Zpz_sc06279.1.g00010.1.am.mk 119 LPLGFRFHPTDEELVRHYLKGKITGQINSEVEVIPEIDVCKCEPWDLP 166
                                   699************************9999****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-18107166IPR003441NAC domain
PROSITE profilePS5100521.217119166IPR003441NAC domain
PfamPF023651.9E-7120163IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MISHYHALFL PYHPAPPSRL EQLPSHPSLA ASKRAAACGR VERVRVRSQV STAQTHEPDW  60
AVASVALATN TPRRGWGPSR YAGSGGVYPP SAANPPRSGR RRISSSHRAT MTVMELKALP  120
LGFRFHPTDE ELVRHYLKGK ITGQINSEVE VIPEIDVCKC EPWDLP
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc06279.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2497492e-55AK249749.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf54a18, mRNA sequence.
GenBankAK3659392e-55AK365939.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2039C20.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.27e-20NAC 014