PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc06587.1.g00010.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 132aa MW: 14709 Da PI: 11.1575

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc06587.1.g00010.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.1	6.7e-07	47	86	24	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 24 KkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++++ e ++ v +L+ eN+aL++e++ l+k + +l +e+ Zpz_sc06587.1.g00010.1.am.mk 47 RQKRLPEIQQMVRSLSVENDALRQEMKALQKACTALSKEN 86 688999999***************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.4E-4	45	82	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence Send to blast
VGLAGRRSIP PVPPPRPTGQ RPRKKMHAVY HRVTAYPSII SAFMQARQKR LPEIQQMVRS 60 LSVENDALRQ EMKALQKACT ALSKENGKLE TRLHQLNKRQ EKKGKLQAGQ GATEEAQNGF 120 ALPDLNLPAH DG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	104	KRQEKKGK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc06587.1.g00010.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT084071	5e-43	BT084071.1 Zea mays full-length cDNA clone ZM_BFb0070K03 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004965736.1	4e-41	uncharacterized protein LOC101785507 isoform X1
Refseq	XP_012701131.1	4e-41	uncharacterized protein LOC101785507 isoform X2
TrEMBL	A0A3L6PC00	2e-40	A0A3L6PC00_PANMI; Uncharacterized protein
STRING	Pavir.Da00230.1.p	3e-40	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51