PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc07749.1.g00010.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

HB-other

Protein Properties

Length: 85aa MW: 9444.84 Da PI: 6.7881

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc07749.1.g00010.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.6	5.5e-05	52	79	23	50
SS--HHHHHHHHHHCTS-HHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqN 50 y+++ +r+eL+ lgLt+rq WF+ Zpz_sc07749.1.g00010.1.sm.mkhc 52 LYLNEGKRTELSVLLGLTDRQQPAWFCH 79 599***********************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 85 aa Download sequence Send to blast
MAMDSKPSLH HSERYDAAAH PTLPHVVVKC AAVSIPWAYE MDPTAAMATK DLYLNEGKRT 60 ELSVLLGLTD RQQPAWFCHI QMGHG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc07749.1.g00010.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP28162	3	3