PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc11269.1.g00010.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 145aa MW: 15953 Da PI: 11.0251

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc11269.1.g00010.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.7	2.2e-12	36	81	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ +r +NRe+ArrsR+RK++++eeL +v+ L+aeN + + ++ Zpz_sc11269.1.g00010.1.am.mk 36 RKRKRTLSNRESARRSRARKQQRLEELVAEVARLQAENARAQARIA 81 6778999*******************************97666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-11	32	90	No hit	No description
SMART	SM00338	9.7E-16	32	96	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.22	34	97	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.6E-9	35	79	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.26E-10	36	87	No hit	No description
PROSITE pattern	PS00036	0	39	54	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence Send to blast
KEKIDLAMSS SRRSSSPDSH KDGSTGGVAA STAAERKRKR TLSNRESARR SRARKQQRLE 60 ELVAEVARLQ AENARAQARI AAFDRELGKV DGDNAVLRAR HGELAGRLEA LTGVLEVLQM 120 AGATVDIPEI PDPMLRPWQP PFQMQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	48	55	RRSRARKQ

Functional Description ? help Back to Top
Source	Description
UniProt	May contribute to developmentally specific patterns of gene expression. Binds specifically to ocs elements which are transcriptional enhancer found in the promoters of several plant genes. OCSBF-1 is able to bind to a site within each half of the ocs element as well as to animal AP-1 and CREB sites.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc11269.1.g00010.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002439223.1	6e-59	ocs element-binding factor 1
Refseq	XP_025807736.1	5e-59	bZIP transcription factor 53-like
Swissprot	P24068	2e-30	OCS1_MAIZE; Ocs element-binding factor 1
TrEMBL	A0A2S3H7P6	1e-57	A0A2S3H7P6_9POAL; Uncharacterized protein
TrEMBL	A0A2T7E7P9	1e-57	A0A2T7E7P9_9POAL; Uncharacterized protein
TrEMBL	C5YZG1	1e-57	C5YZG1_SORBI; Uncharacterized protein
STRING	Sb09g002510.1	2e-58	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1886	35	100

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62420.1	5e-17	basic region/leucine zipper motif 53

Publications ? help Back to Top
Singh K, et al. OCSBF-1, a maize ocs enhancer binding factor: isolation and expression during development. Plant Cell, 1990. 2(9): p. 891-903 [PMID:2152133]