PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID augustus_masked-scaffold06132-abinit-gene-0.0-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family BES1
Protein Properties Length: 255aa    MW: 26560.6 Da    PI: 8.0612
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
augustus_masked-scaffold06132-abinit-gene-0.0-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822111.21.7e-3432131496
                                                DUF822   4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGw 60 
                                                              +t+ E+E++k RER RRai++ki+ GLR++G+y+l  raD+ne l+ L+ eAGw
  augustus_masked-scaffold06132-abinit-gene-0.0-mRNA-1  32 SVGRTESEKEKTKMRERNRRAITTKIFQGLRKHGGYCLSPRADINELLRHLASEAGW 88 
                                                           5567999************************************************** PP

                                                DUF822  61 vvedDGttyrkgskpl......eeaeaag.ssasaspesslqs 96 
                                                           vv +DGtt+r +++         ++  +g +s++++p+ss+ +
  augustus_masked-scaffold06132-abinit-gene-0.0-mRNA-1  89 VVLPDGTTFRSSTSSSsnglscCAMCGTGiTSNNTTPCSSVVM 131
                                                           **********877766434433222222214555666776654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.0E-3135166IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MKEAAMGNAV EEGEASGTHQ GKTMKRSNGG SSVGRTESEK EKTKMRERNR RAITTKIFQG  60
LRKHGGYCLS PRADINELLR HLASEAGWVV LPDGTTFRSS TSSSSNGLSC CAMCGTGITS  120
NNTTPCSSVV MGGGGGGGGE YCASTTASPI GDSMSMSMSM SVSMVNNNIN RIGFGGSTSS  180
SLPEGENSPL ELYIYDNGLP GGLHHHPSSA SGGCVGGPLV MGPQYPQQQQ QIQLYVQEAM  240
ASNQNTPVGS PLRRA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023927430.11e-144protein BZR1 homolog 4-like
TrEMBLA0A2N9GPL02e-92A0A2N9GPL0_FAGSY; Uncharacterized protein
STRINGXP_010098573.13e-52(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139791622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.14e-23beta-amylase 7